SEdb 2.0
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Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000152760
Gene: TCTEX1D1 Gene type: protein_coding
Strand: + External links:
Genomic region: chr1:66752459-66779047 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_149200399 chr1:66701614-66780529 Sample_02_1492 Peripheral blood CD34+ derived peripheral blood-derived mast cells 399 16 2095 191 12 186 792 SGIP1,TCTEX1D1,INSL5
SE_02_147800502 chr1:66718423-66762132 Sample_02_1478 Bone EW-3 502 14 1132 95 4 103 550 SGIP1,TCTEX1D1,INSL5
SE_02_148500975 chr1:66719197-66759112 Sample_02_1485 Bone SK-ES-1 975 12 1031 91 4 97 543 SGIP1,TCTEX1D1,INSL5
SE_02_087500602 chr1:66719696-66765078 Sample_02_0875 Peripheral blood Peripheral blood-derived mast cells 602 12 1173 99 5 96 506 SGIP1,TCTEX1D1,INSL5,MIER1
SE_02_145900110 chr1:66725534-66768707 Sample_02_1459 Pancreas THP1+PANC1_shCTCF 110 12 1114 89 3 96 506 SGIP1,TCTEX1D1,INSL5
SE_02_083500685 chr1:66725593-66765082 Sample_02_0835 Bone marrow TEX-HIST1H3H-K27M-Rx_cells 685 10 1023 87 3 93 506 SGIP1,TCTEX1D1,INSL5
SE_02_045900280 chr1:66725651-66765509 Sample_02_0459 Blood ME-1_DMSO_6h 280 12 1029 87 3 93 506 SGIP1,TCTEX1D1,INSL5
SE_02_084100308 chr1:66725673-66761850 Sample_02_0841 Blood THP-1_untr 308 8 938 80 2 93 506 SGIP1,TCTEX1D1,INSL5
SE_02_083300602 chr1:66725696-66765077 Sample_02_0833 Bone marrow TEX-HIST1H3F-K27I-2-Rx_cells 602 10 1023 87 3 93 506 SGIP1,TCTEX1D1,INSL5
SE_02_083400878 chr1:66725794-66765116 Sample_02_0834 Bone marrow TEX-HIST1H3F-WT-Rx_cells 878 8 1023 87 3 93 506 SGIP1,TCTEX1D1,INSL5
SE_02_083600948 chr1:66725808-66765151 Sample_02_0836 Bone marrow TEX-HIST1H3H-WT-Rx_cells 948 7 1023 87 3 93 506 SGIP1,TCTEX1D1,INSL5
SE_02_061700652 chr1:66725833-66758884 Sample_02_0617 HSPC FL CD34+CD38-/lowCD90+ HSPC 652 5 860 78 2 93 506 SGIP1,TCTEX1D1,INSL5
SE_02_148300549 chr1:66725836-66758713 Sample_02_1483 Bone RD-ES 549 14 856 77 2 89 506 SGIP1,TCTEX1D1,INSL5
SE_02_134000752 chr1:66726279-66764948 Sample_02_1340 Blood acute myeloid leukemia 752 13 1006 86 3 93 506 SGIP1,TCTEX1D1,INSL5
SE_02_082100118 chr1:66726289-66770098 Sample_02_0821 Haematopoietic and lymphoid tissue SET-2_WT_GSK-LSD1 118 11 1132 94 5 106 506 SGIP1,TCTEX1D1,INSL5
SE_02_033600255 chr1:66726332-66771297 Sample_02_0336 Haematopoietic and lymphoid tissue SET2 255 5 1171 101 5 119 540 SGIP1,TCTEX1D1,INSL5
SE_02_143100396 chr1:66726333-66765438 Sample_02_1431 Blood T cell 396 7 1013 86 3 93 506 SGIP1,TCTEX1D1,INSL5
SE_02_145800149 chr1:66726412-66758892 Sample_02_1458 Pancreas THP1+PANC1_shNC 149 17 841 77 2 93 506 SGIP1,TCTEX1D1,INSL5
SE_02_082200207 chr1:66727203-66767667 Sample_02_0822 Haematopoietic and lymphoid tissue SET-2_insR_DMSO 207 9 1046 87 3 93 506 SGIP1,TCTEX1D1,INSL5
SE_02_046000280 chr1:66727300-66765062 Sample_02_0460 Blood ME-1_I-10-49_6h 280 12 983 85 3 93 506 SGIP1,TCTEX1D1,INSL5
SE_02_148100140 chr1:66728179-66766102 Sample_02_1481 Bone MIC 140 6 993 83 3 93 506 SGIP1,TCTEX1D1,INSL5
SE_02_057600410 chr1:66728836-66770654 Sample_02_0576 Blood HEL_sgLKB1e2 410 19 1091 92 5 107 528 SGIP1,TCTEX1D1,INSL5
SE_02_057900500 chr1:66729312-66770317 Sample_02_0579 Blood HEL_sgNeg2 500 19 1072 90 5 105 493 SGIP1,TCTEX1D1,INSL5
SE_02_058000442 chr1:66729339-66770478 Sample_02_0580 Blood HEL_sgSIK3e4 442 13 1073 91 5 104 497 SGIP1,TCTEX1D1,INSL5
SE_02_057800329 chr1:66731146-66761778 Sample_02_0578 Blood MOLM-13_sgSIK3e4 329 19 799 68 1 84 460 SGIP1,TCTEX1D1,INSL5
SE_02_058100328 chr1:66731538-66760969 Sample_02_0581 Blood MOLM13_empty_HG 328 12 775 68 1 84 460 SGIP1,TCTEX1D1,INSL5
SE_02_057500305 chr1:66731566-66761787 Sample_02_0575 Blood MOLM13_sgLKB1e2 305 21 794 68 1 84 460 SGIP1,TCTEX1D1,INSL5
SE_02_134500090 chr1:66731583-66761128 Sample_02_1345 Leukophereses leukophereses_p358 90 14 777 68 1 84 460 SGIP1,TCTEX1D1,INSL5
SE_02_025500617 chr1:66731609-66758645 Sample_02_0255 Haematopoietic and lymphoid tissue MOLM13 617 4 709 64 1 80 460 SGIP1,TCTEX1D1,INSL5
SE_02_054800148 chr1:66731639-66762158 Sample_02_0548 Blood THP-1_24h with EtOH 148 9 803 70 1 84 460 SGIP1,TCTEX1D1,INSL5
SE_02_057400341 chr1:66731653-66761778 Sample_02_0574 Blood MOLM-13_sgNeg2 341 13 792 68 1 84 460 SGIP1,TCTEX1D1,INSL5
SE_02_099300312 chr1:66731659-66761823 Sample_02_0993 Blood MOLM-13_empty 312 25 793 68 1 84 460 SGIP1,TCTEX1D1,INSL5
SE_02_057700278 chr1:66731666-66761792 Sample_02_0577 Blood MOLM13_empty 278 8 791 68 1 84 460 SGIP1,TCTEX1D1,INSL5
SE_02_058200244 chr1:66731690-66758719 Sample_02_0582 Blood MOLM13_SIK3TQ_HG 244 7 710 65 1 83 460 SGIP1,TCTEX1D1,INSL5
SE_02_099400245 chr1:66731741-66761782 Sample_02_0994 Blood MOLM13_SIK3TQ 245 27 790 68 1 84 460 SGIP1,TCTEX1D1,INSL5
SE_02_099500328 chr1:66731744-66761734 Sample_02_0995 Blood MOLM-13_empty vector 328 25 787 68 1 84 460 SGIP1,TCTEX1D1,INSL5
SE_02_109800527 chr1:66732088-66760976 Sample_02_1098 Blood THP1_DMSO_noPMA 527 11 763 68 1 84 460 SGIP1,TCTEX1D1,INSL5
SE_02_134700431 chr1:66732149-66750461 Sample_02_1347 Leukophereses leukophereses_p401 431 16 473 46 0 63 307 SGIP1,TCTEX1D1
SE_02_117000109 chr1:66749638-66768292 Sample_02_1170 Blood HEL92.1.7 109 8 493 33 2 26 153 SGIP1,TCTEX1D1,INSL5
SE_02_082000471 chr1:66750240-66770090 Sample_02_0820 Haematopoietic and lymphoid tissue SET-2_WT_DMSO 471 6 524 37 4 35 153 SGIP1,TCTEX1D1,INSL5
SE_02_122100497 chr1:66756259-66780181 Sample_02_1221 Bone marrow KMS11 497 7 656 72 3 77 242 TCTEX1D1,INSL5
SE_01_004200357 chr1:66756380-66781135 Sample_01_0042 Haematopoietic and lymphoid tissue KMS-11 357 4 701 76 3 77 242 TCTEX1D1,INSL5
Genomic distribution of SEs associated with TCTEX1D1
Genome Browser

The strength of the tissue affected by the gene

Expression of TCTEX1D1

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)