SEdb 2.0
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Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000186212
Gene: SOWAHB Gene type: protein_coding
Strand: - External links:
Genomic region: chr4:76894152-76898144 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_049900027 chr4:76688324-76785208 Sample_02_0499 Fetal lung IMR90 IR Senescence 27 36 2144 137 13 211 2182 SHROOM3,SOWAHB
SE_02_127901169 chr4:76718426-76784292 Sample_02_1279 Bone Mesenchymal stem cells 1169 20 1503 76 7 145 1876 SHROOM3,SOWAHB,MIR4450
SE_02_119900799 chr4:76719632-76766551 Sample_02_1199 Brain GBM35 799 14 1080 55 7 115 1270 SHROOM3,SOWAHB
SE_02_155200274 chr4:76722541-76767688 Sample_02_1552 HMSCs hMSC ATCC SCRC-4000 274 20 1052 50 7 115 1270 SHROOM3,SOWAHB
SE_02_156600054 chr4:76722782-76784993 Sample_02_1566 Dermal Dermal fibroblast 54 15 1439 68 7 145 1876 SHROOM3,SOWAHB,MIR4450
SE_02_060600035 chr4:76722927-76784491 Sample_02_0606 Skin Skin Fibroblast_Nutlin3A 35 13 1424 68 7 145 1876 SHROOM3,SOWAHB
SE_02_157100006 chr4:76722943-76784749 Sample_02_1571 Fibroblast Fibroblast cells 6 14 1428 68 7 145 1876 SHROOM3,SOWAHB
SE_02_060500078 chr4:76722950-76784489 Sample_02_0605 Skin Skin Fibroblast_DMSO 78 14 1424 68 7 145 1876 SHROOM3,SOWAHB
SE_02_050000057 chr4:76722964-76785224 Sample_02_0500 Fetal lung IMR90_#2 57 38 1442 69 7 145 1876 SHROOM3,SOWAHB
SE_02_143700721 chr4:76722971-76785596 Sample_02_1437 Liver LSEC-TNF 721 23 1453 69 7 145 1876 SHROOM3,SOWAHB,MIR4450
SE_02_056900169 chr4:76723000-76786845 Sample_02_0569 Periodontal ligament mesenchymal stem cell 169 36 1485 70 8 145 1876 SHROOM3,SOWAHB
SE_02_093600663 chr4:76723065-76784188 Sample_02_0936 Retinal Pigmented Epithelial RPE188_TnT 663 15 1417 68 7 145 1876 SHROOM3,SOWAHB,SEPT11
SE_02_072700127 chr4:76723076-76784426 Sample_02_0727 Fetal lung IMR90_Etoposide 127 20 1419 68 7 145 1876 SHROOM3,SOWAHB
SE_02_087900632 chr4:76723080-76784380 Sample_02_0879 Ovary SVOG3e cells_Dox_12h_control 632 15 1419 68 7 145 1876 SHROOM3,SOWAHB,MIR548AH
SE_02_049800031 chr4:76723099-76784457 Sample_02_0498 Fetal lung IMR90 Senescent_1 31 37 1419 68 7 145 1876 SHROOM3,SOWAHB
SE_02_088300543 chr4:76723107-76784451 Sample_02_0883 Ovary SVOG3e_cells_Dox_12h_transduced with V5-FOXL2 C134W 543 13 1419 68 7 145 1876 SHROOM3,SOWAHB
SE_02_063700047 chr4:76723116-76784393 Sample_02_0637 Fibroblast fibroblast_WT_GM07492 47 36 1419 68 7 145 1876 SHROOM3,SOWAHB
SE_02_143600413 chr4:76723120-76785233 Sample_02_1436 Liver LSEC-Ctrl 413 21 1436 69 7 145 1876 SHROOM3,SOWAHB,MIR548AH
SE_02_145400192 chr4:76723121-76768149 Sample_02_1454 Arter pulmonary arterial smooth muscle cells_PAH1_sialdh1a3 192 12 1046 50 7 115 1270 SHROOM3,SOWAHB,MIR548AH
SE_02_143800381 chr4:76723130-76786058 Sample_02_1438 Liver LSEC 381 21 1461 70 7 145 1876 SHROOM3,SOWAHB,MIR4450
SE_02_088600465 chr4:76723136-76784482 Sample_02_0886 Skin foreskin_ p63KLF4 465 15 1418 68 7 145 1876 SHROOM3,SOWAHB
SE_02_137500148 chr4:76723140-76784409 Sample_02_1375 Pancreas Pancreatic_tumor_associated_fibroblasts_B0010A_untreated 148 36 1418 68 7 145 1876 SHROOM3,SOWAHB
SE_02_137600225 chr4:76723146-76784525 Sample_02_1376 Pancreas Pancreatic_tumor_associated_fibroblasts_B011C_untreated 225 29 1420 68 7 145 1876 SHROOM3,SOWAHB
SE_02_088201031 chr4:76723154-76783961 Sample_02_0882 Ovary SVOG3e_cells_noDox_transduced with V5-FOXL2 C134W 1031 14 1405 68 7 143 1876 SHROOM3,SOWAHB,SEPT11
SE_02_063600217 chr4:76723181-76784297 Sample_02_0636 Skin BJ5ta 217 22 1414 68 7 145 1876 SHROOM3,SOWAHB,SEPT11
SE_02_145500169 chr4:76723187-76766800 Sample_02_1455 Arter pulmonary arterial smooth muscle cells_PAH2_sialdh1a3 169 10 1013 48 7 115 1270 SHROOM3,SOWAHB,SEPT11
SE_02_113300102 chr4:76723194-76784094 Sample_02_1133 Liver Hepatic stellate cells 102 13 1408 68 7 144 1876 SHROOM3,SOWAHB,MIR4450
SE_02_045200323 chr4:76723199-76783009 Sample_02_0452 Skin hTERT immortalised human skin fibroblasts_Non-tumourigenic 323 12 1390 68 7 141 1855 SHROOM3,SOWAHB,MIR4450
SE_02_101500797 chr4:76723221-76784441 Sample_02_1015 Embryo H9_ Undifferentiated 797 9 1415 68 7 145 1876 SHROOM3,SOWAHB
SE_02_083900265 chr4:76723248-76764969 Sample_02_0839 Embryo hNPCs_K755R/+ 265 17 958 46 6 111 1270 SHROOM3,SOWAHB
SE_02_145200094 chr4:76723320-76784165 Sample_02_1452 Arter pulmonary arterial smooth muscle cells_PAH2_sictrl 94 15 1410 68 7 145 1876 SHROOM3,SOWAHB,MIR548AH
SE_02_145100229 chr4:76723424-76768176 Sample_02_1451 Arter pulmonary arterial smooth muscle cells_PAH1_sictrl 229 10 1039 50 7 115 1270 SHROOM3,SOWAHB,SEPT11
SE_02_086900235 chr4:76723461-76765555 Sample_02_0869 Fibroblast VH10_NO_UV 235 23 972 46 7 111 1270 SHROOM3,SOWAHB
SE_02_158300281 chr4:76723509-76784392 Sample_02_1583 Fetal lung IMR90_empty_GM 281 31 1410 68 7 145 1876 SHROOM3,SOWAHB,MIR4450
SE_02_135500384 chr4:76723529-76783852 Sample_02_1355 Umbilical cord umbilical cord-derived mesenchymal stem cells_old 384 9 1397 68 7 143 1876 SHROOM3,SOWAHB,MIR4450
SE_02_105801072 chr4:76723559-76784293 Sample_02_1058 Bone A673_SA2 Rescue 1072 14 1408 68 7 145 1876 SHROOM3,SOWAHB
SE_02_137400618 chr4:76723560-76784448 Sample_02_1374 Pancreas Pancreatic_tumor_associated_fibroblasts_B009B_untreated 618 22 1410 68 7 145 1876 SHROOM3,SOWAHB
SE_02_088100744 chr4:76723569-76784307 Sample_02_0881 Ovary SVOG3e cells_Dox_12h_transduced_V5-FOXL2_WT 744 11 1409 68 7 145 1876 SHROOM3,SOWAHB,MIR548AH
SE_02_087800650 chr4:76723590-76784224 Sample_02_0878 Ovary SVOG3e cells_noDox_control 650 15 1405 68 7 145 1876 SHROOM3,SOWAHB,MIR548AH
SE_02_063801026 chr4:76723593-76784268 Sample_02_0638 Fibroblast HGPS fibroblast_LMNA_AG11498 1026 16 1406 68 7 145 1876 SHROOM3,SOWAHB,MIR4450
SE_02_088001318 chr4:76723598-76783871 Sample_02_0880 Ovary SVOG3e cells_noDox_transduced_V5-FOXL2_WT 1318 12 1397 68 7 143 1876 SHROOM3,SOWAHB,MIR548AH
SE_02_137800356 chr4:76723615-76784417 Sample_02_1378 Pancreas Pancreatic_tumor_associated_fibroblasts_CAF08_untreated 356 24 1410 68 7 145 1876 SHROOM3,SOWAHB
SE_02_126600317 chr4:76723714-76784517 Sample_02_1266 Bone Im-GCT-4072_G34W-repair_WT_E3 317 10 1409 67 7 145 1876 SHROOM3,SOWAHB
SE_02_137700430 chr4:76723786-76784284 Sample_02_1377 Pancreas Pancreatic_tumor_associated_fibroblasts_BF1_untreated 430 17 1404 67 7 145 1876 SHROOM3,SOWAHB
SE_02_086700427 chr4:76725674-76785166 Sample_02_0867 Bone marrow Bone marrow derived hMSC_d0 427 28 1388 65 7 145 1876 SHROOM3,SOWAHB
SE_02_114500526 chr4:76727479-76787609 Sample_02_1145 Peripheral nerve SNF02.2_PRC2 WT 526 12 1418 64 8 145 1876 SHROOM3,SOWAHB
SE_02_053301273 chr4:76733041-76768210 Sample_02_0533 Blood vessel Circle of Willis_54y 1273 9 860 39 6 103 1221 SHROOM3,SOWAHB
SE_02_045300080 chr4:76733725-76814544 Sample_02_0453 Neuroblastoma SJNB3 80 14 2020 104 9 150 1827 SHROOM3,SOWAHB
SE_02_047400530 chr4:76735975-76784482 Sample_02_0474 Fibroblast umbilical cord Fibroblast 530 15 1182 53 6 131 1827 SHROOM3,SOWAHB,MIR548AH
SE_02_124100555 chr4:76735978-76784039 Sample_02_1241 Skin MCC26_virus_negative 555 16 1172 53 6 129 1827 SHROOM3,SOWAHB
SE_02_049700074 chr4:76736014-76755634 Sample_02_0497 Fetal lung IMR90_#1 74 9 514 26 2 82 1062 SHROOM3,SOWAHB
SE_02_135600567 chr4:76736048-76783814 Sample_02_1356 Umbilical cord umbilical cord-derived mesenchymal stem cells_Young 567 9 1168 53 6 129 1827 SHROOM3,SOWAHB,SEPT11
SE_02_126400225 chr4:76737402-76785128 Sample_02_1264 Bone Im-GCT-4072_G34W KO 225 8 1171 53 6 131 1827 SHROOM3,SOWAHB
SE_02_126500361 chr4:76737571-76785019 Sample_02_1265 Bone Im-GCT-4072_G34W-repair_WT_D6 361 10 1162 52 6 131 1827 SHROOM3,SOWAHB
SE_02_139900365 chr4:76741035-76784401 Sample_02_1399 Bone U2OS_siMLL3.1 365 15 1042 48 6 90 1336 SHROOM3,SOWAHB,SEPT11
SE_00_005300444 chr4:76743077-76782491 Sample_00_0053 Embryo trophoblast cell originated from H1 444 16 958 44 6 61 1000 SHROOM3,SOWAHB
SE_02_048101028 chr4:76743828-76785251 Sample_02_0481 Mammary gland MDA-MB231 1028 12 984 45 6 66 1065 SHROOM3,SOWAHB
SE_02_139800234 chr4:76744872-76787183 Sample_02_1398 Bone U2OS_siNC 234 22 1015 43 7 64 1065 SHROOM3,SOWAHB,SEPT11
SE_02_055700089 chr4:76747895-76784314 Sample_02_0557 iPSCs WT hiPSC#1 89 12 863 38 6 60 1065 SHROOM3,SOWAHB
SE_02_055600677 chr4:76748126-76782335 Sample_02_0556 iPSCs BOFS hiPSC cl1 677 7 826 38 6 55 977 SHROOM3,SOWAHB
SE_02_087600333 chr4:76750881-76785039 Sample_02_0876 Muscle SMS-CTR_CASZ1b_Ctrl 333 16 801 34 6 57 1021 SHROOM3,SOWAHB,SEPT11
SE_01_011500443 chr4:76752405-76784547 Sample_01_0115 Skeletal Muscle myotube originated from skeletal muscle myoblast 443 8 754 32 6 57 1021 SHROOM3,SOWAHB,SEPT11
SE_02_126900851 chr4:76752465-76784546 Sample_02_1269 Bone Im-GCT-4072_G34W-repair_WT_A4 851 3 754 32 6 57 1021 SHROOM3,SOWAHB
SE_02_125900336 chr4:76752503-76784811 Sample_02_1259 Bone Im-GCT-3504_G34W-repair_WT_4C7 336 7 758 32 6 57 1021 SHROOM3,SOWAHB,SEPT11
SE_02_136400323 chr4:76752920-76784271 Sample_02_1364 Pancreas pancreatic tumor_associated fibroblasts_triptolide_18h 323 10 742 32 6 57 1021 SHROOM3,SOWAHB
SE_02_126700873 chr4:76779402-76785326 Sample_02_1267 Bone Im-GCT-4072_G34W 873 2 116 1 0 16 397 SHROOM3,SOWAHB,SEPT11
SE_02_126300925 chr4:76779649-76785056 Sample_02_1263 Bone Im-GCT-4072_G34W unedited 925 1 107 0 0 11 369 SHROOM3,SOWAHB,SEPT11
SE_02_126000676 chr4:76780104-76784339 Sample_02_1260 Bone Im-GCT-3504_G34W-repair_4F5 676 1 85 0 0 6 323 SHROOM3,SOWAHB,SEPT11
SE_02_126200616 chr4:76780651-76784373 Sample_02_1262 Bone Im-GCT-3504_G34W 616 1 74 0 0 6 272 SHROOM3,SOWAHB
SE_02_087600416 chr4:76798375-76813590 Sample_02_0876 Muscle SMS-CTR_CASZ1b_Ctrl 416 9 440 42 2 17 0 SOWAHB,SEPT11
SE_02_108000610 chr4:76798452-76813162 Sample_02_1080 Muscle JR1 shCtrl 610 9 433 42 2 17 0 SOWAHB,SEPT11
SE_02_105801167 chr4:76798487-76815032 Sample_02_1058 Bone A673_SA2 Rescue 1167 9 481 46 3 17 0 SOWAHB
SE_02_074300425 chr4:76801238-76813017 Sample_02_0743 Embryo ES derived mesoderm_day2 425 3 347 37 1 17 0 SOWAHB,SEPT11
SE_02_156001241 chr4:76801429-76833238 Sample_02_1560 Gastrointestinal Stromal GIST-9_PDGFRA e18 1241 7 848 47 8 25 0 SOWAHB
SE_02_055700638 chr4:76801453-76813553 Sample_02_0557 iPSCs WT hiPSC#1 638 2 352 37 1 17 0 SOWAHB
SE_02_084001255 chr4:76801801-76831605 Sample_02_0840 Embryo hNPCs_R1159Q/+ 1255 4 780 46 7 22 0 SOWAHB
SE_02_083901254 chr4:76802091-76832411 Sample_02_0839 Embryo hNPCs_K755R/+ 1254 5 795 46 7 25 0 SOWAHB
SE_02_151100464 chr4:76867653-76894886 Sample_02_1511 Lung H3122_untreated 464 8 768 82 0 13 198 SOWAHB
Genomic distribution of SEs associated with SOWAHB
Genome Browser

The strength of the tissue affected by the gene

Expression of SOWAHB

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)