Gene overview
| Strategies/Algorithm: | closest | Ensembl ID: | ENSG00000172139 |
| Gene: | SLC9C1 | Gene type: | protein_coding |
| Strand: | - | External links: |
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| Genomic region: | chr3:112140898-112294227 | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_02_077600028 | chr3:112280632-112338404 |
Sample_02_0776 | Pancreas | EndoC-BH1 | 28 | 9 | 1459 | 178 | 3 | 34 | 594 | SLC9C1,CD200 |
| SE_02_121900126 | chr3:112283949-112306783 |
Sample_02_1219 | Bone marrow | H929 | 126 | 6 | 571 | 71 | 0 | 9 | 225 | SLC9C1,CD200 |
| SE_02_122401135 | chr3:112284199-112307562 |
Sample_02_1224 | Bone marrow | normal plasma cell | 1135 | 8 | 598 | 77 | 0 | 9 | 225 | SLC9C1,CD200 |
| SE_02_149300617 | chr3:112289824-112309717 |
Sample_02_1493 | Skin | SK-MEL-5_DMSO_6h | 617 | 5 | 495 | 61 | 0 | 6 | 186 | SLC9C1,CD200 |
| SE_02_122301110 | chr3:112295738-112303885 |
Sample_02_1223 | Bone marrow | KMS28BM | 1110 | 2 | 192 | 17 | 0 | 0 | 122 | CD200,SLC9C1 |
| SE_02_077500516 | chr3:112297081-112328592 |
Sample_02_0775 | Pancreas | EndoC-BH1_SE | 516 | 12 | 802 | 83 | 1 | 10 | 180 | CD200,SLC9C1 |
| SE_02_155600217 | chr3:112297417-112327458 |
Sample_02_1556 | Gastrointestinal Stromal | GIST-5_KIT e9 | 217 | 9 | 764 | 78 | 1 | 8 | 152 | CD200,SLC9C1 |
| SE_02_075400127 | chr3:112297435-112323828 |
Sample_02_0754 | Embryo | ES-derived progenitors Pancreatic Progenitors 1 WT | 127 | 3 | 675 | 69 | 0 | 5 | 122 | CD200,SLC9C1 |
| SE_02_086100238 | chr3:112297636-112316232 |
Sample_02_0861 | iPSCs | SAH_WT | 238 | 5 | 494 | 48 | 0 | 0 | 122 | CD200,SLC9C1 |
| SE_02_049300112 | chr3:112300708-112323419 |
Sample_02_0493 | Islets | differentiated hESCs Early pancreatic progenitor cells | 112 | 6 | 579 | 63 | 0 | 5 | 122 | CD200,SLC9C1 |
| SE_02_049400205 | chr3:112300804-112324003 |
Sample_02_0494 | Islets | differentiated hESCs Late pancreatic progenitor cells | 205 | 3 | 595 | 63 | 0 | 5 | 122 | CD200,SLC9C1 |
| SE_02_116100242 | chr3:112301507-112322495 |
Sample_02_1161 | Embryo | H1_shZNF587 | 242 | 6 | 549 | 60 | 0 | 5 | 122 | CD200,SLC9C1 |
| SE_02_098200502 | chr3:112301606-112310114 |
Sample_02_0982 | Brain | H3.3K27M-KO_BT245-C2P3 | 502 | 6 | 231 | 24 | 0 | 0 | 122 | CD200,SLC9C1 |
| SE_01_009500709 | chr3:112301850-112308798 |
Sample_01_0095 | Embryo | neuroepithelial stem cell stably expressing HES5 originated from H9 | 709 | 2 | 188 | 19 | 0 | 0 | 122 | CD200,SLC9C1 |
| SE_02_052400627 | chr3:112301880-112323794 |
Sample_02_0524 | Pancreas | iPS derived pancreatic precursor cells_Lane2 | 627 | 9 | 567 | 60 | 0 | 5 | 122 | CD200,SLC9C1 |
| SE_02_052500522 | chr3:112301904-112323778 |
Sample_02_0525 | Pancreas | iPS derived pancreatic precursor cells_Lane1 | 522 | 9 | 567 | 60 | 0 | 5 | 122 | CD200,SLC9C1 |
| SE_02_083800504 | chr3:112301935-112308763 |
Sample_02_0838 | Embryo | hNPCs_WT | 504 | 4 | 185 | 19 | 0 | 0 | 122 | CD200,SLC9C1 |
| SE_02_056000621 | chr3:112301942-112305451 |
Sample_02_0560 | iPSCs | FX52_Cas9-inactive Tet1_CGG sgRNA | 621 | 3 | 86 | 8 | 0 | 0 | 122 | CD200,SLC9C1 |
| SE_02_055901025 | chr3:112301983-112304866 |
Sample_02_0559 | iPSCs | FX52 iPSCs dC-T | 1025 | 1 | 76 | 6 | 0 | 0 | 122 | CD200,SLC9C1 |
| SE_00_004800178 | chr3:112302106-112305004 |
Sample_00_0048 | Embryo | neuronal stem cell originated from H1 | 178 | 2 | 77 | 6 | 0 | 0 | 122 | CD200,SLC9C1 |
Genomic distribution of SEs associated with SLC9C1