SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_056000621
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: iPSCs
Biosample name: FX52_Cas9-inactive Tet1_CGG sgRNA
Genomic region: chr3:112301942-112305451
Size: 3509
Super-enhancer rank 621
Number of SE elements: 3
ChIP density(Case|Control): 3683.0464|635.4799
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SLC9C1;
ROSE Overlap ;
ROSE Proximal CD200; SLC9C1;
ROSE Closest SLC9C1;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_056000621 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers