SEdb 2.0
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Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000166128
Gene: RAB8B Gene type: protein_coding
Strand: + External links:
Genomic region: chr15:63189560-63267776 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_017200444 chr15:63126513-63265536 Sample_02_0172 Lung IMR-90_quiescent 444 22 3521 337 12 387 1113 LACTB,RAB8B,RPS27L,APH1B
SE_02_104301226 chr15:63138108-63234891 Sample_02_1043 Peripheral blood Peripheral blood cells_CTCL1200 1226 26 2506 244 7 304 585 LACTB,RPS27L,RAB8B,APH1B
SE_02_085700292 chr15:63155173-63213230 Sample_02_0857 Glioblastoma Glioblastoma neurosphere cell_HF-3035 292 12 1470 123 2 203 412 RPS27L,RAB8B,LACTB
SE_02_097000183 chr15:63155192-63211391 Sample_02_0970 Brain H3.3K27M_XHSJ019-X1-1-Rx_xenograft 183 11 1423 122 2 201 412 RPS27L,RAB8B,LACTB
SE_02_059401101 chr15:63155388-63211506 Sample_02_0594 iPSC-derived neural progenitors 1101 6 1422 122 2 201 412 RPS27L,RAB8B,LACTB
SE_02_021100255 chr15:63155440-63213747 Sample_02_0211 Lung MRC-5_NFD_1DPT 255 9 1482 125 2 204 411 RAB8B,RPS27L,LACTB
SE_02_095600413 chr15:63172314-63245027 Sample_02_0956 Brain IDH1_2658 413 14 1870 152 2 266 213 RAB8B,APH1B,RPS27L
SE_02_076200493 chr15:63175833-63259624 Sample_02_0762 Podocyte podocyte_CTL 493 30 2133 176 3 278 362 RAB8B,APH1B,RPS27L
SE_02_012600467 chr15:63175925-63248327 Sample_02_0126 Blood Induced-regulatory-T-cells_DMSO 467 15 1851 145 1 257 213 RAB8B,APH1B,RPS27L
SE_02_013200436 chr15:63175925-63248327 Sample_02_0132 Lung 1015_CL 436 15 1851 145 1 257 213 RAB8B,APH1B,RPS27L
SE_02_008100082 chr15:63176090-63248399 Sample_02_0081 Blood Monocyte-derived_dendritic_cells 82 13 1850 146 2 257 213 RAB8B,APH1B,RPS27L
SE_02_088200163 chr15:63176108-63259522 Sample_02_0882 Ovary SVOG3e_cells_noDox_transduced with V5-FOXL2 C134W 163 25 2125 174 3 278 357 RAB8B,APH1B,RPS27L
SE_02_087900158 chr15:63176108-63259679 Sample_02_0879 Ovary SVOG3e cells_Dox_12h_control 158 21 2128 175 3 279 365 RAB8B,APH1B,RPS27L
SE_02_088300140 chr15:63176168-63257471 Sample_02_0883 Ovary SVOG3e_cells_Dox_12h_transduced with V5-FOXL2 C134W 140 23 2075 172 3 277 354 RAB8B,APH1B,RPS27L
SE_02_087800161 chr15:63176437-63259090 Sample_02_0878 Ovary SVOG3e cells_noDox_control 161 20 2111 174 3 278 354 RAB8B,APH1B,RPS27L
SE_02_143700429 chr15:63176460-63258911 Sample_02_1437 Liver LSEC-TNF 429 27 2105 174 3 278 354 RAB8B,APH1B,RPS27L
SE_02_057200766 chr15:63176514-63192039 Sample_02_0572 Brain LN229_1_mM_glucose 766 6 406 33 0 83 178 RAB8B,RPS27L
SE_02_149600344 chr15:63176605-63193146 Sample_02_1496 Other monocyte-derived dendritic cells_R848_24h 344 12 425 33 0 91 178 RAB8B,RPS27L,APH1B,LACTB
SE_02_088100118 chr15:63176619-63257254 Sample_02_0881 Ovary SVOG3e cells_Dox_12h_transduced_V5-FOXL2_WT 118 18 2061 172 3 277 354 RAB8B,APH1B,RPS27L
SE_02_088000129 chr15:63176688-63259628 Sample_02_0880 Ovary SVOG3e cells_noDox_transduced_V5-FOXL2_WT 129 20 2117 175 3 278 362 RAB8B,APH1B,RPS27L
SE_02_093001196 chr15:63176744-63193052 Sample_02_0930 Mid-gestation placenta trophoblast__SynT 1196 12 424 33 0 91 178 RAB8B,RPS27L
SE_02_076000098 chr15:63176906-63260417 Sample_02_0760 Ovary BIN-67_SMARCA4 98 36 2138 175 3 280 383 RAB8B,APH1B,RPS27L
SE_02_078200941 chr15:63177991-63215072 Sample_02_0782 Blood MEC1 941 6 960 72 0 173 178 RAB8B,RPS27L
SE_02_010200411 chr15:63180094-63248299 Sample_02_0102 Peripheral blood Macrophages_GM-CSF_72h_IL4 411 11 1744 140 1 249 213 RAB8B,APH1B,RPS27L
SE_02_048101001 chr15:63185106-63257698 Sample_02_0481 Mammary gland MDA-MB231 1001 29 1852 155 3 242 354 RAB8B,APH1B,RPS27L
SE_02_144500554 chr15:63185151-63258940 Sample_02_1445 Adipose SW872_TAZ4SA 554 24 1883 156 3 242 354 RAB8B,APH1B,RPS27L
SE_02_026200186 chr15:63185164-63257826 Sample_02_0262 Osteoblastic hFOB_JQ1_differentiated 186 13 1854 154 3 242 354 RAB8B,APH1B,RPS27L
SE_02_143800578 chr15:63185341-63259420 Sample_02_1438 Liver LSEC 578 29 1892 156 3 242 354 RAB8B,APH1B,RPS27L
SE_02_144900176 chr15:63185356-63258290 Sample_02_1449 Adipose SW872_YAP_TFE3 176 28 1859 156 3 242 354 RAB8B,APH1B,RPS27L
SE_02_049900950 chr15:63185422-63257154 Sample_02_0499 Fetal lung IMR90 IR Senescence 950 26 1833 154 3 235 354 RAB8B,APH1B,RPS27L
SE_02_153400572 chr15:63185897-63236522 Sample_02_1534 Mammary gland MDA-MB-231_ER?WT_0min 572 10 1315 108 1 194 178 RAB8B,APH1B,RPS27L
SE_02_028600381 chr15:63185912-63220310 Sample_02_0286 Liver HuH7_IL-1alpha_1h 381 7 891 72 0 150 178 RAB8B,RPS27L
SE_02_158300276 chr15:63185983-63260283 Sample_02_1583 Fetal lung IMR90_empty_GM 276 29 1902 157 3 238 383 RAB8B,APH1B,RPS27L
SE_02_145200276 chr15:63186218-63251752 Sample_02_1452 Arter pulmonary arterial smooth muscle cells_PAH2_sictrl 276 19 1693 134 2 217 268 RAB8B,APH1B,RPS27L
SE_02_046600358 chr15:63186220-63257540 Sample_02_0466 Adipose visceral adipocytes 358 43 1823 152 3 234 354 RAB8B,APH1B,RPS27L
SE_02_013100382 chr15:63187503-63240565 Sample_02_0131 Lung 1015_PT 382 13 1370 114 1 186 178 RAB8B,APH1B,RPS27L
SE_02_012700407 chr15:63187503-63245593 Sample_02_0127 Blood Induced-regulatory-T-cells_CPI-703 407 14 1493 120 1 205 213 RAB8B,APH1B,RPS27L
SE_02_010700374 chr15:63188112-63257048 Sample_02_0107 Endometrium EEC16 374 11 1755 149 3 223 354 RAB8B,APH1B,RPS27L
SE_02_022200539 chr15:63188256-63211695 Sample_02_0222 Blood DU-528 539 2 607 47 0 118 178 RAB8B,RPS27L
SE_01_008500800 chr15:63188267-63248181 Sample_01_0085 Stomach stomach 800 9 1526 122 1 203 213 RAB8B,APH1B,RPS27L
SE_00_000700432 chr15:63188285-63211174 Sample_00_0007 Blood naive thymus-derived CD4-positive,alpha-beta T cell 432 2 592 47 0 115 178 RAB8B,RPS27L
SE_00_000800448 chr15:63188307-63197027 Sample_00_0008 Blood CD4-positive-alpha-beta-memory-T-cell 448 1 215 15 0 67 178 RAB8B,RPS27L
SE_01_008401045 chr15:63188447-63248283 Sample_01_0084 Spleen spleen 1045 10 1528 120 1 201 213 RAB8B,APH1B,RPS27L
SE_02_003100629 chr15:63188448-63199701 Sample_02_0031 Haematopoietic and lymphoid tissue blood Jurkat 629 1 270 18 0 86 178 RAB8B,RPS27L
SE_02_023400408 chr15:63188454-63265293 Sample_02_0234 Tonsil Th17 408 18 1952 155 3 243 577 RAB8B,APH1B,RPS27L
SE_01_008200783 chr15:63188540-63248151 Sample_01_0082 Right lobe of liver right-lobe-of-liver 783 11 1519 120 1 199 213 RAB8B,APH1B,RPS27L
SE_01_009000480 chr15:63188549-63248233 Sample_01_0090 Lung upper-lobe-of-left-lung 480 10 1523 120 1 199 213 RAB8B,APH1B,RPS27L
SE_01_002400421 chr15:63188551-63248616 Sample_01_0024 Blood CD14-positive-monocyte 421 10 1532 121 2 199 213 RAB8B,APH1B,RPS27L
SE_00_000900222 chr15:63188562-63235140 Sample_00_0009 Blood CD8-positive-alpha-beta-T-cell 222 6 1202 95 1 175 178 RAB8B,APH1B,RPS27L
SE_01_002000568 chr15:63188578-63245631 Sample_01_0020 Blood B-cell 568 9 1457 117 1 198 213 RAB8B,APH1B,RPS27L
SE_04_000200630 chr15:63188590-63227657 Sample_04_0002 Blood cold shocked K562 630 4 1021 79 1 154 178 RAB8B,APH1B,RPS27L
SE_02_076100104 chr15:63188591-63260306 Sample_02_0761 Ovary BIN-67_SMARCA4.T910M 104 17 1829 151 3 221 383 RAB8B,APH1B,RPS27L
SE_00_004400459 chr15:63188623-63213557 Sample_00_0044 Cord blood T-cell 459 3 647 48 0 116 178 RAB8B,RPS27L
SE_02_010100416 chr15:63188646-63248415 Sample_02_0101 Peripheral blood Macrophages_GM-CSF_72h_IFN-y 416 10 1525 121 2 198 213 RAB8B,APH1B,RPS27L
SE_04_000100899 chr15:63188689-63227584 Sample_04_0001 Blood heat shocked K562 899 4 1016 79 1 154 178 RAB8B,APH1B,RPS27L
SE_00_002700817 chr15:63188700-63197356 Sample_00_0027 Blood natural-killer-cell 817 1 208 14 0 71 178 RAB8B,RPS27L
SE_02_143100881 chr15:63188784-63247800 Sample_02_1431 Blood T cell 881 12 1505 120 1 197 213 RAB8B,APH1B,RPS27L
SE_02_153000946 chr15:63188806-63232941 Sample_02_1530 Peripheral blood neutrophils_0BA0X 946 12 1141 90 1 166 178 RAB8B,APH1B,RPS27L
SE_02_146700675 chr15:63188815-63238756 Sample_02_1467 Blood HUDEP-2_LRFKO 675 8 1291 108 1 178 178 RAB8B,APH1B,RPS27L
SE_02_081600715 chr15:63188815-63251262 Sample_02_0816 Ovary Clear cell ovarian cancer 715 25 1609 129 2 200 268 RAB8B,APH1B,RPS27L
SE_02_010400427 chr15:63189350-63248023 Sample_02_0104 Blood neutrophils 427 10 1487 119 1 196 209 RAB8B,APH1B,RPS27L
SE_00_004700386 chr15:63189482-63195668 Sample_00_0047 Blood effector memory CD4+ alpha-beta T cell 386 2 149 11 0 50 134 RAB8B,RPS27L
SE_02_126300331 chr15:63189498-63257276 Sample_02_1263 Bone Im-GCT-4072_G34W unedited 331 17 1717 145 3 211 299 RAB8B,APH1B,RPS27L
SE_02_023100106 chr15:63189525-63245751 Sample_02_0231 Tonsil ILC1 106 15 1425 115 1 190 153 RAB8B,APH1B,RPS27L
SE_02_013900184 chr15:63189531-63257382 Sample_02_0139 Liver RT236 184 14 1721 145 3 210 294 RAB8B,APH1B,RPS27L
SE_02_002500604 chr15:63189542-63203725 Sample_02_0025 Blood CD19donorA 604 6 339 26 0 88 117 RAB8B,RPS27L
SE_02_023200276 chr15:63189542-63247813 Sample_02_0232 Tonsil ILC3 276 17 1479 118 1 190 152 RAB8B,APH1B,RPS27L
SE_02_058000886 chr15:63189543-63244989 Sample_02_0580 Blood HEL_sgSIK3e4 886 21 1410 115 1 190 146 RAB8B,APH1B,RPS27L
SE_02_113000323 chr15:63189550-63226933 Sample_02_1130 Haematopoietic and lymphoid tissue bone marrow K562_??Np63?? expressing 323 10 975 76 1 140 113 RAB8B,RPS27L
SE_02_057600738 chr15:63189553-63247011 Sample_02_0576 Blood HEL_sgLKB1e2 738 28 1464 116 1 188 148 RAB8B,APH1B,RPS27L
SE_02_111600577 chr15:63189555-63227634 Sample_02_1116 Haematopoietic and lymphoid tissue bone marrow K562_native 577 13 987 77 1 144 112 RAB8B,APH1B,RPS27L
SE_02_121500436 chr15:63189557-63194766 Sample_02_1215 Blood Jurkat ZBTB1 KO_Asparagine deprivation 436 1 123 10 0 34 111 RAB8B,RPS27L
SE_02_057900873 chr15:63189566-63238894 Sample_02_0579 Blood HEL_sgNeg2 873 26 1267 107 1 169 107 RAB8B,APH1B,RPS27L
SE_02_103300638 chr15:63189595-63238964 Sample_02_1033 Haematopoietic and lymphoid tissue bone marrow K562 638 8 1265 107 1 169 94 RAB8B,APH1B,RPS27L
SE_02_143600502 chr15:63189624-63257554 Sample_02_1436 Liver LSEC-Ctrl 502 33 1714 145 3 207 265 RAB8B,APH1B,RPS27L
SE_02_078400872 chr15:63189922-63216089 Sample_02_0784 Blood OSU-CLL 872 8 655 54 0 108 1 RAB8B,RPS27L
SE_02_122901345 chr15:63190989-63228326 Sample_02_1229 Haematopoietic and lymphoid tissue bone marrow K562_Control 1345 28 968 75 1 135 0 RAB8B,APH1B,RPS27L
SE_02_082601219 chr15:63192052-63247268 Sample_02_0826 Stomach gastric tumor 1219 20 1409 110 1 174 35 RAB8B,APH1B,RPS27L
SE_02_109900976 chr15:63192209-63227241 Sample_02_1099 Haematopoietic and lymphoid tissue bone marrow K562_DMSO_noIFNG 976 18 921 70 1 119 0 RAB8B,RPS27L
SE_02_146000359 chr15:63192515-63247066 Sample_02_1460 Blood Mutz-3 359 14 1399 110 1 167 35 RAB8B,APH1B,RPS27L
SE_02_098700443 chr15:63192552-63227424 Sample_02_0987 Blood K562_Control_1 443 13 918 70 1 121 0 RAB8B,RPS27L
SE_02_098800614 chr15:63192668-63227991 Sample_02_0988 Blood K562_EPZ 614 12 926 72 1 123 0 RAB8B,APH1B,RPS27L
SE_01_008800515 chr15:63193412-63257744 Sample_01_0088 Tibial nerve tibial-nerve 515 11 1640 138 3 187 176 RAB8B,APH1B,RPS27L
SE_02_112800347 chr15:63193545-63247124 Sample_02_1128 Adipose visceral adipose_CTL_HCTR10 347 14 1378 109 1 162 35 RAB8B,APH1B,RPS27L
SE_02_128000757 chr15:63193733-63257882 Sample_02_1280 Bone Mesenchymal stem cells_SPC_mutation_ EF1 757 13 1633 137 3 183 176 RAB8B,APH1B,RPS27L
SE_02_047500836 chr15:63194079-63236270 Sample_02_0475 Induced hepatocyte-like cells hepatocyte-like cells 836 15 1090 88 1 137 0 RAB8B,APH1B,RPS27L
SE_02_071201245 chr15:63194121-63245498 Sample_02_0712 Pancreas BxPC3_sgNEG 1245 12 1311 105 1 156 35 RAB8B,APH1B,RPS27L
SE_02_137800360 chr15:63194222-63257234 Sample_02_1378 Pancreas Pancreatic_tumor_associated_fibroblasts_CAF08_untreated 360 22 1599 135 3 176 176 RAB8B,APH1B,RPS27L
SE_02_046501449 chr15:63196949-63256960 Sample_02_0465 Adipose subcutaneous adipocytes 1449 26 1534 133 3 158 176 RAB8B,APH1B,RPS27L
SE_02_071300964 chr15:63198954-63245677 Sample_02_0713 Pancreas BxPC3_sgTP63 964 15 1205 102 1 118 35 RAB8B,APH1B,RPS27L
SE_02_155200591 chr15:63199067-63265230 Sample_02_1552 HMSCs hMSC ATCC SCRC-4000 591 25 1697 140 3 158 395 RAB8B,APH1B,RPS27L
SE_01_005600335 chr15:63201623-63257907 Sample_01_0056 Bone osteoblast 335 9 1451 125 3 134 176 RAB8B,APH1B,RPS27L
SE_02_042000165 chr15:63202188-63251544 Sample_02_0420 Pectoralis major muscle LHCN-M2_dox_6h 165 11 1300 104 2 115 90 RAB8B,APH1B,RPS27L
SE_02_033600516 chr15:63209872-63239738 Sample_02_0336 Haematopoietic and lymphoid tissue SET2 516 6 761 68 1 69 0 RAB8B,APH1B
SE_02_157300576 chr15:63209899-63252023 Sample_02_1573 Endothelial Undifferentiated Pleomorphic Sarcoma 576 23 1079 89 2 92 90 RAB8B,APH1B
SE_01_006800213 chr15:63210155-63215004 Sample_01_0068 Prostate: derived from metastatic site: vertebral metastasis VCaP 213 1 123 7 0 8 0 RAB8B
SE_02_093000485 chr15:63210416-63251868 Sample_02_0930 Mid-gestation placenta trophoblast__SynT 485 35 1060 85 2 91 90 RAB8B,APH1B
SE_02_061301149 chr15:63210498-63246834 Sample_02_0613 Liposarcoma MLPS_T1 1149 13 923 74 1 88 35 RAB8B,APH1B
SE_02_010300643 chr15:63211154-63248202 Sample_02_0103 Peripheral blood Macrophages_GM-CSF_72h_TNF-a_PGE2_Pam3CSK4 643 5 936 75 1 88 35 RAB8B,APH1B
SE_02_149400142 chr15:63211683-63247937 Sample_02_1494 Other monocyte-derived dendritic cells_0h 142 18 912 75 1 85 35 RAB8B,APH1B,RPS27L,LACTB
SE_02_137700838 chr15:63211709-63251988 Sample_02_1377 Pancreas Pancreatic_tumor_associated_fibroblasts_BF1_untreated 838 20 1032 86 2 89 90 RAB8B,APH1B
SE_02_092900471 chr15:63211748-63252377 Sample_02_0929 Mid-gestation placenta trophoblast__CytT 471 27 1040 86 2 89 90 RAB8B,APH1B
SE_02_112900803 chr15:63211793-63247054 Sample_02_1129 Adipose visceral adipose_CTL_HCTR13 803 14 896 73 1 85 35 RAB8B,APH1B
SE_02_113300789 chr15:63211820-63251312 Sample_02_1133 Liver Hepatic stellate cells 789 13 1014 83 2 88 90 RAB8B,APH1B
SE_02_149600342 chr15:63211946-63248017 Sample_02_1496 Other monocyte-derived dendritic cells_R848_24h 342 17 910 74 1 85 35 RAB8B,APH1B,RPS27L,LACTB
SE_02_132800504 chr15:63212457-63251182 Sample_02_1328 Non-mineralized aortic valves aortic valve interstitial cells 504 9 998 83 2 88 90 RAB8B,APH1B
SE_02_062000705 chr15:63213047-63245528 Sample_02_0620 Aortic Aortic Endothelial Cells_DF 705 10 824 71 1 84 35 RAB8B,APH1B
Genomic distribution of SEs associated with RAB8B
Genome Browser

The strength of the tissue affected by the gene

Expression of RAB8B

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)