SEdb 2.0
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Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000183527
Gene: PSMG1 Gene type: protein_coding
Strand: - External links:
Genomic region: chr21:39174769-39183488 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_022200012 chr21:38927105-39086022 Sample_02_0222 Blood DU-528 12 12 4902 273 27 173 0 PSMG1
SE_02_023700033 chr21:38946985-39049061 Sample_02_0237 Colon V389 33 15 3203 164 16 112 0 PSMG1
SE_01_004300080 chr21:38953802-39041354 Sample_01_0043 Blood KOPT-K1 80 12 2812 154 15 99 0 PSMG1
SE_02_022600034 chr21:38954129-39041826 Sample_02_0226 Blood KOPTK1 34 8 2817 154 15 99 0 PSMG1
SE_02_036200084 chr21:38970089-39023787 Sample_02_0362 Haematopoietic and lymphoid tissue REH 84 7 1797 105 11 63 0 PSMG1
SE_00_003900262 chr21:38970213-39024509 Sample_00_0039 Spleen spleen_3y 262 9 1820 108 11 63 0 PSMG1
SE_02_012800234 chr21:38976404-39041108 Sample_02_0128 Haematopoietic and lymphoid tissue ALL-SIL 234 17 2105 138 11 55 0 PSMG1
SE_02_034300062 chr21:38976740-39042385 Sample_02_0343 Bone marrow HSPC_A0 62 16 2128 139 11 55 0 PSMG1
SE_02_010300080 chr21:38978335-39021687 Sample_02_0103 Peripheral blood Macrophages_GM-CSF_72h_TNF-a_PGE2_Pam3CSK4 80 8 1444 83 10 53 0 PSMG1
SE_02_017600377 chr21:38978563-39023493 Sample_02_0176 Peripheral blood LOUCY 377 6 1507 91 10 53 0 PSMG1
SE_02_014400158 chr21:38978731-39021966 Sample_02_0144 Peripheral blood MV411_DMSO 158 5 1441 84 10 53 0 PSMG1
SE_01_004400659 chr21:38978932-39021830 Sample_01_0044 Haematopoietic and lymphoid tissue Loucy 659 6 1428 82 10 53 0 PSMG1
SE_02_043100520 chr21:38979012-39011861 Sample_02_0431 Peripheral blood CD34+HSPC-derived-erythroid-precursors 520 7 1106 60 8 48 0 PSMG1
SE_02_034200137 chr21:38979036-39023070 Sample_02_0342 Liver HSPCs_F0 137 8 1469 87 10 53 0 PSMG1
SE_02_033100412 chr21:38979092-39018360 Sample_02_0331 Haematopoietic and lymphoid tissue MOLM14_untreated 412 9 1309 69 9 49 0 PSMG1
SE_02_033700090 chr21:38979108-39024246 Sample_02_0337 Haematopoietic and lymphoid tissue MV411_untreat 90 6 1515 92 10 53 0 PSMG1
SE_02_025600129 chr21:38979165-39024263 Sample_02_0256 Peripheral blood MV411 129 2 1514 92 10 53 0 PSMG1
SE_02_034500053 chr21:38979172-39022031 Sample_02_0345 Blood AML8 53 13 1427 83 10 53 0 PSMG1
SE_02_025500177 chr21:38979261-39023589 Sample_02_0255 Haematopoietic and lymphoid tissue MOLM13 177 13 1489 90 10 53 0 PSMG1
SE_02_008100417 chr21:38979749-39016628 Sample_02_0081 Blood Monocyte-derived_dendritic_cells 417 6 1239 63 8 48 0 PSMG1
SE_02_034400095 chr21:38980072-39022631 Sample_02_0344 Blood CD34 95 13 1434 84 9 53 0 PSMG1
SE_02_039600558 chr21:38980163-39063346 Sample_02_0396 Skin NHEK-D 558 29 2618 174 14 71 0 PSMG1
SE_02_036000159 chr21:38980232-39017693 Sample_02_0360 Haematopoietic and lymphoid tissue SEM 159 6 1263 66 7 48 0 PSMG1
SE_01_008700492 chr21:38981046-39041686 Sample_01_0087 Thyroid gland thyroid-gland 492 9 1969 130 10 55 0 PSMG1
SE_02_029600344 chr21:38983403-39006445 Sample_02_0296 Neuroblastoma CLB-BER-Lud 344 2 804 43 6 43 0 PSMG1
SE_02_030800402 chr21:38983488-39005992 Sample_02_0308 Neuroblastoma SJNB1 402 5 781 43 6 43 0 PSMG1
SE_02_024200192 chr21:38983781-39058014 Sample_02_0242 Colon V481 192 8 2327 158 14 68 0 PSMG1
SE_01_006900762 chr21:38983798-39041338 Sample_01_0069 Adrenal gland adrenal-gland 762 10 1866 124 10 52 0 PSMG1
SE_00_000300476 chr21:38984013-39009529 Sample_00_0003 Adrenal gland adrenal-gland_97d 476 4 855 50 7 45 0 PSMG1
SE_02_001900601 chr21:38984026-39034803 Sample_02_0019 Embryo Neural crest cells 601 16 1685 108 10 52 0 PSMG1
SE_01_008500382 chr21:38984240-39106984 Sample_01_0085 Stomach stomach 382 16 3700 252 24 101 0 PSMG1
SE_01_008600788 chr21:38984444-39041359 Sample_01_0086 Thoracic aorta thoracic-aorta 788 8 1840 121 10 52 0 PSMG1
SE_01_007500392 chr21:38984533-39105687 Sample_01_0075 Esophagus squamous epithelium esophagus-squamous-epithelium 392 20 3644 249 24 98 0 PSMG1
SE_01_007900302 chr21:38984594-39111452 Sample_01_0079 Peyers patch Peyers-patch 302 18 3837 250 24 109 0 PSMG1
SE_01_007300843 chr21:38984620-39098434 Sample_01_0073 Coronary artery coronary-artery 843 17 3453 243 24 95 0 PSMG1
SE_00_004100746 chr21:38984641-39034509 Sample_00_0041 Stomach stomach_3y 746 9 1656 104 10 52 0 PSMG1
SE_03_000100259 chr21:38984649-39022364 Sample_03_0001 Foreskin foreskin-keratinocyte 259 6 1262 71 9 50 0 PSMG1
SE_00_004300953 chr21:38984689-39034639 Sample_00_0043 Stomach stomach_96d 953 9 1658 104 10 52 0 PSMG1
SE_00_002200206 chr21:38984700-39041181 Sample_00_0022 Lung lung_30y 206 12 1827 119 10 52 0 PSMG1
SE_01_009000118 chr21:38984722-39105791 Sample_01_0090 Lung upper-lobe-of-left-lung 118 18 3640 247 23 98 0 PSMG1
SE_02_017300873 chr21:38984753-39021977 Sample_02_0173 Lung IMR-90_senescent 873 12 1240 68 8 50 0 PSMG1
SE_00_003401116 chr21:38984766-39007349 Sample_00_0034 Right cardiac atrium right-cardiac-atrium 1116 6 777 39 5 45 0 PSMG1
SE_00_003500682 chr21:38984955-39034813 Sample_00_0035 Sigmoid colon sigmoid-colon 682 8 1656 103 9 52 0 PSMG1
SE_01_008201011 chr21:38985359-39041280 Sample_01_0082 Right lobe of liver right-lobe-of-liver 1011 10 1809 118 9 44 0 PSMG1
SE_02_035500493 chr21:38985466-39034649 Sample_02_0355 Colon HCT15 493 9 1637 102 9 44 0 PSMG1
SE_02_002700340 chr21:38989193-39021734 Sample_02_0027 Umbilical vein HUVEC_VEGF_4h 340 3 1078 60 6 31 0 PSMG1
SE_02_021600529 chr21:38990466-39038122 Sample_02_0216 Skin NHEK_scramble 529 9 1545 104 7 29 0 PSMG1
SE_02_019400202 chr21:38993291-39036201 Sample_02_0194 Kidney Patient_x750T 202 5 1383 81 4 26 0 PSMG1
SE_02_036100386 chr21:38995014-39035290 Sample_02_0361 Colon HT29_DMSO 386 4 1302 76 4 25 0 PSMG1
SE_02_035300491 chr21:38995032-39049066 Sample_02_0353 Colon HT29 491 9 1662 98 4 27 0 PSMG1
SE_02_020901175 chr21:39003674-39052224 Sample_02_0209 Lung MRC-5_MRC5_1DPT 1175 9 1490 103 6 25 0 PSMG1
SE_00_001500725 chr21:39013949-39031078 Sample_00_0015 Lung IMR-90 725 3 550 47 3 7 0 PSMG1
SE_01_004500991 chr21:39014398-39052554 Sample_01_0045 Mammary gland mammary-epithelial-cell 991 5 1139 88 5 17 0 PSMG1
SE_02_033600860 chr21:39031657-39047150 Sample_02_0336 Haematopoietic and lymphoid tissue SET2 860 1 424 32 0 0 0 PSMG1
SE_01_008400629 chr21:39038923-39106613 Sample_01_0084 Spleen spleen 629 12 1902 133 14 49 0 PSMG1
SE_00_004000142 chr21:39039640-39108052 Sample_00_0040 Spleen spleen_30y 142 20 1930 131 14 49 0 PSMG1
SE_01_007000819 chr21:39039874-39125526 Sample_01_0070 Ascending aorta ascending-aorta 819 12 2441 178 16 68 0 PSMG1
SE_03_000100310 chr21:39045588-39052449 Sample_03_0001 Foreskin foreskin-keratinocyte 310 2 193 11 2 10 0 PSMG1
SE_01_004100597 chr21:39046484-39052365 Sample_01_0041 Skin keratinocyte 597 2 167 10 2 10 0 PSMG1
SE_03_000200215 chr21:39046757-39052444 Sample_03_0002 Foreskin foreskin-keratinocyte-calcium2.5day 215 2 155 10 2 10 0 PSMG1
SE_00_003500720 chr21:39050984-39105811 Sample_00_0035 Sigmoid colon sigmoid-colon 720 17 1546 116 14 44 0 PSMG1
SE_00_002201133 chr21:39054624-39098420 Sample_00_0022 Lung lung_30y 1133 6 1237 93 10 33 0 PSMG1
SE_02_133000220 chr21:39057260-39126565 Sample_02_1330 Blood AMU-AML1 220 23 2003 152 12 52 0 PSMG1
SE_02_044500322 chr21:39058682-39139121 Sample_02_0445 Lung lung metastasis from primary osteosarcoma tumor M10 322 27 2293 207 13 74 0 PSMG1
SE_01_011000755 chr21:39065183-39138142 Sample_01_0110 Aorta thoracic aorta_37y 755 24 2074 196 13 69 0 PSMG1
SE_01_009300680 chr21:39065426-39137965 Sample_01_0093 Aorta ascending aorta 680 18 2070 194 13 69 0 PSMG1
SE_01_008600911 chr21:39065642-39125561 Sample_01_0086 Thoracic aorta thoracic-aorta 911 10 1728 131 12 52 0 PSMG1
SE_02_053300680 chr21:39066575-39137204 Sample_02_0533 Blood vessel Circle of Willis_54y 680 14 2024 189 13 69 0 PSMG1
SE_00_005600557 chr21:39066849-39126094 Sample_00_0056 Sigmoid colon sigmoid colon 3y 557 49 1709 133 12 52 0 PSMG1
SE_01_008200810 chr21:39071250-39105748 Sample_01_0082 Right lobe of liver right-lobe-of-liver 810 6 994 74 10 20 0 PSMG1
SE_02_044401065 chr21:39071793-39122378 Sample_02_0444 Bone osteosarcoma tumor P10 1065 12 1499 111 12 42 0 PSMG1
SE_02_010300091 chr21:39077473-39107447 Sample_02_0103 Peripheral blood Macrophages_GM-CSF_72h_TNF-a_PGE2_Pam3CSK4 91 3 891 53 9 19 0 PSMG1
SE_02_034200780 chr21:39077762-39107721 Sample_02_0342 Liver HSPCs_F0 780 6 888 51 9 19 0 PSMG1
SE_02_131800218 chr21:39077839-39106762 Sample_02_1318 Brain hMGLs_SORL1-A528T 218 11 855 50 9 19 0 PSMG1
SE_02_131500275 chr21:39077871-39108748 Sample_02_1315 Brain hMGLs_INPP5D SNP 275 14 931 51 9 19 0 PSMG1
SE_02_131400289 chr21:39077990-39098600 Sample_02_1314 Brain hMGLs_TREM2-KO 289 11 627 43 9 13 0 PSMG1
SE_02_131300297 chr21:39078173-39105366 Sample_02_1313 Brain hMGLs_CD33_SNP 297 12 790 47 9 16 0 PSMG1
SE_02_131200204 chr21:39078247-39106883 Sample_02_1312 Brain hMGLs_WT 204 12 844 47 9 19 0 PSMG1
SE_02_131700234 chr21:39078338-39100170 Sample_02_1317 Brain hMGLs_SORL1-KO 234 13 668 43 9 16 0 PSMG1
SE_02_131600403 chr21:39078537-39099006 Sample_02_1316 Brain hMGLs_TREM2-R47H 403 8 617 42 9 15 0 PSMG1
SE_02_008100228 chr21:39078569-39106956 Sample_02_0081 Blood Monocyte-derived_dendritic_cells 228 4 835 47 9 19 0 PSMG1
SE_02_146000835 chr21:39078856-39107061 Sample_02_1460 Blood Mutz-3 835 9 833 47 9 19 0 PSMG1
SE_02_133100846 chr21:39078899-39126655 Sample_02_1331 Blood Molm13_CTRL 846 11 1427 103 11 38 0 PSMG1
SE_00_003900686 chr21:39082633-39105942 Sample_00_0039 Spleen spleen_3y 686 5 658 38 7 16 0 PSMG1
SE_02_104601683 chr21:39083277-39137573 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 1683 18 1562 145 10 55 0 PSMG1
SE_02_020700184 chr21:39083688-39106665 Sample_02_0207 Stomach FU97 184 10 656 36 7 19 0 PSMG1
SE_02_114500838 chr21:39085164-39135749 Sample_02_1145 Peripheral nerve SNF02.2_PRC2 WT 838 12 1463 142 10 54 0 PSMG1
SE_02_096100395 chr21:39087052-39107963 Sample_02_0961 Brain H3.3K27M_Tumor-derived cell-line_DIPGVI_c27_cells 395 4 611 34 7 18 0 PSMG1
SE_02_057601195 chr21:39174542-39185120 Sample_02_0576 Blood HEL_sgLKB1e2 1195 4 318 49 0 24 366 PSMG1
SE_02_058001138 chr21:39180904-39185066 Sample_02_0580 Blood HEL_sgSIK3e4 1138 1 125 18 0 6 178 PSMG1
Genomic distribution of SEs associated with PSMG1
Genome Browser

The strength of the tissue affected by the gene

Expression of PSMG1

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)