SEdb 2.0
  1. Search
  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000186951
Gene: PPARA Gene type: protein_coding
Strand: + External links:
Genomic region: chr22:46150521-46243756 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_00_001400043 chr22:46125355-46173607 Sample_00_0014 Heart left ventricle heart-left-ventricle 43 8 1549 127 2 100 472 PPARA,LOC400931,MIRLET7A3,MIRLET7B,MIR3619
SE_02_032500162 chr22:46125579-46173751 Sample_02_0325 Liver hepatocytes_d1 162 12 1547 127 2 101 472 PPARA,LOC400931,MIRLET7A3,MIRLET7B,MIR3619
SE_02_032700296 chr22:46125849-46173820 Sample_02_0327 Liver hepatocytes_d6 296 11 1546 127 2 101 472 PPARA,LOC400931,MIRLET7A3,MIRLET7B,MIR3619
SE_00_005700319 chr22:46129733-46172776 Sample_00_0057 Heart right ventricle 3y 319 7 1351 109 2 96 472 PPARA,MIR3619,MIRLET7B,MIRLET7BHG,MIRLET7A3,MIR4763
SE_02_108300316 chr22:46139400-46173320 Sample_02_1083 Macula macula 316 11 1021 81 2 76 472 PPARA,MIRLET7A3,MIR4763,MIR3619,MIRLET7B
SE_02_108200271 chr22:46139413-46172738 Sample_02_1082 Retina retina 271 12 1000 78 2 76 472 PPARA,MIRLET7A3,MIR4763,MIR3619,MIRLET7B
SE_01_008200664 chr22:46146477-46153121 Sample_01_0082 Right lobe of liver right-lobe-of-liver 664 1 192 11 0 41 377 PPARA,MIRLET7A3,MIRLET7B
SE_01_007900866 chr22:46146541-46153137 Sample_01_0079 Peyers patch Peyers-patch 866 1 183 11 0 41 377 PPARA,MIRLET7A3,MIRLET7B
SE_02_035400956 chr22:46146718-46172343 Sample_02_0354 Colon Colo205 956 5 721 53 2 62 472 PPARA,MIRLET7A3,MIRLET7B
SE_00_004900193 chr22:46147186-46172961 Sample_00_0049 Small intestine small intestine 30y 193 15 736 55 2 62 472 PPARA,MIRLET7A3,MIR4763,MIRLET7B
SE_02_103500386 chr22:46147531-46201016 Sample_02_1035 Mammary gland HCC70_Vehicle 386 22 1641 101 3 100 734 PPARA,MIRLET7A3,CDPF1,MIR4763,MIRLET7B
SE_02_103600213 chr22:46147571-46236173 Sample_02_1036 Mammary gland HCC70_XY018 213 46 2646 193 8 164 1258 PPARA,MIRLET7B,CDPF1,PKDREJ,TTC38,MIRLET7A3,MIR4763
SE_02_047800057 chr22:46147700-46205392 Sample_02_0478 Colon normal colon mucosa 57 11 1759 104 3 99 734 PPARA,MIRLET7A3,CDPF1,MIR4763,MIRLET7B,TTC38,PKDREJ
SE_02_047700423 chr22:46147837-46174655 Sample_02_0477 Colon intestinal epithelial organoids_139a 423 5 772 58 3 62 472 PPARA,MIRLET7A3,MIR4763,MIRLET7B
SE_02_093700772 chr22:46148400-46171856 Sample_02_0937 Retinal Pigmented Epithelial RPE190_Con 772 4 654 51 2 56 472 PPARA,MIRLET7A3,MIR4763,MIRLET7B
SE_02_153700384 chr22:46158961-46180098 Sample_02_1537 Mammary gland MDA-MB-231_ER?_L540Q_45min 384 5 686 44 2 20 217 PPARA,MIRLET7A3,MIR4763,MIRLET7B
SE_02_153600598 chr22:46162972-46179300 Sample_02_1536 Mammary gland MDA-MB-231_ER?_L540Q_0min 598 5 530 35 2 15 217 PPARA,MIR4763,MIRLET7B
SE_02_148100910 chr22:46165262-46177101 Sample_02_1481 Bone MIC 910 6 399 24 2 7 217 PPARA
SE_02_147500817 chr22:46166350-46177467 Sample_02_1475 Bone CHLA-25 817 2 384 17 2 7 217 PPARA
SE_02_128001135 chr22:46170078-46177218 Sample_02_1280 Bone Mesenchymal stem cells_SPC_mutation_ EF1 1135 1 272 12 1 7 217 PPARA
SE_00_003601478 chr22:46188412-46205011 Sample_00_0036 Small intestine small-intestine_108days 1478 4 521 30 0 32 140 PPARA,C22ORF40
SE_00_002001300 chr22:46188910-46205229 Sample_00_0020 Large intestine large-intestine_108d 1300 4 512 30 0 31 88 PPARA,C22ORF40
SE_02_047700530 chr22:46189830-46206410 Sample_02_0477 Colon intestinal epithelial organoids_139a 530 8 526 27 0 26 78 PPARA,CDPF1
SE_01_007900813 chr22:46190372-46205504 Sample_01_0079 Peyers patch Peyers-patch 813 2 486 26 0 22 78 PPARA,C22ORF40
SE_00_004900603 chr22:46191183-46205388 Sample_00_0049 Small intestine small intestine 30y 603 12 458 25 0 22 78 PPARA,CDPF1
Genomic distribution of SEs associated with PPARA
Genome Browser

The strength of the tissue affected by the gene

Expression of PPARA

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)