SEdb 2.0
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Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000141744
Gene: PNMT Gene type: protein_coding
Strand: + External links:
Genomic region: chr17:39667981-39670475 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_092100236 chr17:39652126-39681523 Sample_02_0921 Heart embryonic heart_CS22 236 10 858 108 13 44 3512 STARD3,TCAP,PNMT,PGAP3,PPP1R1B,NEUROD2,ERBB2,MIEN1,MIR4728
SE_02_090100451 chr17:39652230-39681100 Sample_02_0901 Heart left ventricle_LV1471 451 10 846 108 13 44 3512 STARD3,TCAP,PNMT,PGAP3,PPP1R1B,NEUROD2,ERBB2,MIEN1,MIR4728
SE_02_092300197 chr17:39652414-39681472 Sample_02_0923 Heart fetal heart_PCW10_12522 197 7 851 108 13 43 3512 STARD3,TCAP,PNMT,PGAP3,PPP1R1B,NEUROD2,ERBB2,MIEN1,MIR4728
SE_02_092200242 chr17:39652495-39681261 Sample_02_0922 Heart fetal heart_PCW10_12434 242 10 844 108 13 43 3512 STARD3,TCAP,PNMT,PGAP3,PPP1R1B,NEUROD2,ERBB2,MIEN1,MIR4728
SE_02_124900389 chr17:39652546-39681402 Sample_02_1249 Bone marrow RS4_11_DMSO_4h 389 11 847 107 13 43 3512 STARD3,TCAP,PNMT,PGAP3,PPP1R1B,NEUROD2,ERBB2,MIEN1,MIR4728
SE_02_091000424 chr17:39652594-39680785 Sample_02_0910 Heart left ventricle_DCM_LV1275 424 6 834 107 13 43 3512 STARD3,TCAP,PNMT,PGAP3,PPP1R1B,NEUROD2,ERBB2,MIEN1,MIR4728
SE_02_088900377 chr17:39652797-39681010 Sample_02_0889 Heart left ventricle_LV1183 377 6 829 105 13 43 3512 STARD3,TCAP,PNMT,PGAP3,PPP1R1B,NEUROD2,ERBB2,MIEN1,MIR4728
SE_02_092500196 chr17:39652849-39681453 Sample_02_0925 Heart fetal heart_PCW17_12570 196 9 834 104 13 43 3512 STARD3,TCAP,PNMT,PGAP3,PPP1R1B,NEUROD2,ERBB2,MIEN1,MIR4728
SE_02_092400133 chr17:39652854-39681454 Sample_02_0924 Heart fetal heart_PCW10_12569 133 7 834 104 13 43 3512 STARD3,TCAP,PNMT,PGAP3,PPP1R1B,NEUROD2,ERBB2,MIEN1,MIR4728
SE_02_089100289 chr17:39652859-39680907 Sample_02_0891 Heart left ventricle_LV1202 289 7 824 104 13 43 3512 STARD3,TCAP,PNMT,PGAP3,PPP1R1B,NEUROD2,ERBB2,MIEN1,MIR4728
SE_00_004600068 chr17:39652988-39680781 Sample_00_0046 Heart right ventricle_34y 68 10 818 104 13 42 3498 STARD3,TCAP,PNMT,PGAP3,PPP1R1B,NEUROD2,ERBB2,MIEN1,MIR4728
SE_01_009800220 chr17:39653095-39680934 Sample_01_0098 Heart left ventricle_51y 220 4 820 104 13 34 3468 STARD3,TCAP,PNMT,PGAP3,PPP1R1B,NEUROD2,ERBB2,MIEN1,MIR4728
SE_01_009400780 chr17:39657391-39680560 Sample_01_0094 Gastrocnemius medialis gastrocnemius medialis_54y 780 4 683 92 13 19 3169 STARD3,TCAP,PNMT,PGAP3,PPP1R1B,NEUROD2,ERBB2,MIEN1,MIR4728
SE_01_008100302 chr17:39657525-39681720 Sample_01_0081 Right atrium auricular region right-atrium-auricular-region 302 2 700 93 13 19 3169 STARD3,PGAP3,TCAP,PNMT,PPP1R1B,ERBB2,C17ORF37,NEUROD2
SE_02_125200423 chr17:39657600-39682657 Sample_02_1252 Bone marrow RS4_11_DMSO_10h 423 13 717 97 13 19 3165 STARD3,TCAP,PNMT,PGAP3,PPP1R1B,NEUROD2,ERBB2,MIEN1,MIR4728
SE_02_091100301 chr17:39657610-39680735 Sample_02_0911 Heart left ventricle_DCM_LV1290 301 9 677 91 12 19 3165 STARD3,TCAP,PNMT,PGAP3,PPP1R1B,NEUROD2,ERBB2,MIEN1,MIR4728
SE_02_090900516 chr17:39657625-39680734 Sample_02_0909 Heart left ventricle_DCM_LV1264 516 8 677 91 12 19 3164 STARD3,TCAP,PNMT,PGAP3,PPP1R1B,NEUROD2,ERBB2,MIEN1,MIR4728
SE_02_089700450 chr17:39657694-39681064 Sample_02_0897 Heart left ventricle_LV1325 450 8 683 91 12 19 3144 STARD3,TCAP,PNMT,PGAP3,PPP1R1B,NEUROD2,ERBB2,MIEN1,MIR4728
SE_02_088700407 chr17:39657840-39681052 Sample_02_0887 Heart left ventricle_LV1121 407 5 677 90 11 14 3110 STARD3,TCAP,PNMT,PGAP3,PPP1R1B,NEUROD2,ERBB2,MIEN1,MIR4728
SE_02_090300424 chr17:39657877-39680851 Sample_02_0903 Heart left ventricle_DCM_LV1009 424 9 672 90 11 13 3101 STARD3,TCAP,PNMT,PGAP3,PPP1R1B,NEUROD2,ERBB2,MIEN1,MIR4728
SE_02_089300235 chr17:39657878-39681071 Sample_02_0893 Heart left ventricle_LV1226 235 7 678 90 11 13 3101 STARD3,TCAP,PNMT,PGAP3,PPP1R1B,NEUROD2,ERBB2,MIEN1,MIR4728
SE_02_088800335 chr17:39657999-39680987 Sample_02_0888 Heart left ventricle_LV1160 335 6 674 90 11 11 3069 STARD3,TCAP,PNMT,PGAP3,PPP1R1B,ERBB2,MIEN1,MIR4728
SE_02_091900332 chr17:39658055-39680754 Sample_02_0919 Heart left ventricle_DCM_LV1532 332 10 666 90 11 9 3058 STARD3,TCAP,PNMT,PGAP3,PPP1R1B,ERBB2,MIEN1,MIR4728
SE_02_125100399 chr17:39658143-39681436 Sample_02_1251 Bone marrow RS4_11_AZD1775 _10h 399 11 679 90 11 9 3041 STARD3,TCAP,PNMT,PGAP3,PPP1R1B,ERBB2,MIEN1,MIR4728
SE_02_090200304 chr17:39658171-39680888 Sample_02_0902 Heart left ventricle_LV1558 304 10 666 90 11 9 3038 STARD3,TCAP,PNMT,PGAP3,PPP1R1B,ERBB2,MIEN1,MIR4728
SE_02_089800341 chr17:39658174-39681317 Sample_02_0898 Heart left ventricle_LV1356 341 7 674 90 11 9 3038 STARD3,TCAP,PNMT,PGAP3,PPP1R1B,ERBB2,MIEN1,MIR4728
SE_02_091800429 chr17:39658190-39680311 Sample_02_0918 Heart left ventricle_DCM_LV1437 429 13 650 86 11 9 3035 STARD3,TCAP,PNMT,PGAP3,PPP1R1B,ERBB2,MIR4728
SE_00_003400090 chr17:39658245-39681020 Sample_00_0034 Right cardiac atrium right-cardiac-atrium 90 4 668 90 11 9 3026 STARD3,PGAP3,TCAP,PNMT,PPP1R1B,ERBB2,C17ORF37
SE_02_090500558 chr17:39658266-39680908 Sample_02_0905 Heart left ventricle_DCM_LV1033 558 8 665 90 11 9 3020 STARD3,TCAP,PNMT,PGAP3,PPP1R1B,ERBB2,MIEN1,MIR4728
SE_02_089900670 chr17:39658294-39680259 Sample_02_0899 Heart left ventricle_LV1400 670 10 645 86 11 9 3014 STARD3,TCAP,PNMT,PGAP3,PPP1R1B,ERBB2,MIR4728
SE_02_088500841 chr17:39658358-39681238 Sample_02_0885 Blood NALM6_2 841 2 669 90 11 9 2999 STARD3,TCAP,PNMT,PGAP3,PPP1R1B,ERBB2,MIEN1,MIR4728
SE_02_036800132 chr17:39658579-39681684 Sample_02_0368 Skeletal muscle NS134 132 3 673 90 11 9 2948 STARD3,PGAP3,TCAP,PNMT,PPP1R1B,ERBB2,C17ORF37
SE_00_002100123 chr17:39658613-39681542 Sample_00_0021 Lung lung_3y 123 3 668 90 11 9 2948 STARD3,PGAP3,TCAP,PNMT,PPP1R1B,ERBB2,C17ORF37
SE_02_091600538 chr17:39658673-39680434 Sample_02_0916 Heart left ventricle_DCM_LV1392 538 10 642 89 11 9 2927 STARD3,TCAP,PNMT,PGAP3,PPP1R1B,ERBB2,MIR4728
SE_02_043100049 chr17:39658681-39686303 Sample_02_0431 Peripheral blood CD34+HSPC-derived-erythroid-precursors 49 1 780 99 11 9 3102 STARD3,PGAP3,TCAP,PNMT,PPP1R1B,ERBB2,C17ORF37
SE_02_090000510 chr17:39658704-39680731 Sample_02_0900 Heart left ventricle_LV1452 510 6 648 90 11 9 2919 STARD3,TCAP,PNMT,PGAP3,PPP1R1B,ERBB2,MIEN1,MIR4728
SE_02_091501087 chr17:39658723-39680311 Sample_02_0915 Heart left ventricle_DCM_LV1371 1087 12 635 86 11 9 2916 STARD3,TCAP,PNMT,PGAP3,PPP1R1B,ERBB2,MIR4728
SE_02_089500311 chr17:39658742-39680321 Sample_02_0895 Heart left ventricle_LV1259 311 11 635 86 11 9 2912 STARD3,TCAP,PNMT,PGAP3,PPP1R1B,ERBB2,MIR4728
SE_02_091700452 chr17:39658773-39680466 Sample_02_0917 Heart left ventricle_DCM_LV1433 452 7 637 89 11 9 2903 STARD3,TCAP,PNMT,PGAP3,PPP1R1B,ERBB2,MIR4728
SE_02_090400320 chr17:39658826-39681321 Sample_02_0904 Heart left ventricle_DCM_LV1028 320 6 654 90 11 9 2889 STARD3,TCAP,PNMT,PGAP3,PPP1R1B,ERBB2,MIEN1,MIR4728
SE_02_090600490 chr17:39658828-39680949 Sample_02_0906 Heart left ventricle_DCM_LV1072 490 7 649 90 11 9 2889 STARD3,TCAP,PNMT,PGAP3,PPP1R1B,ERBB2,MIEN1,MIR4728
SE_02_089400259 chr17:39658909-39680761 Sample_02_0894 Heart left ventricle_LV1248 259 8 644 90 11 9 2871 STARD3,TCAP,PNMT,PGAP3,PPP1R1B,ERBB2,MIEN1,MIR4728
SE_01_009700784 chr17:39658975-39680458 Sample_01_0097 Gastrocnemius medialis gastrocnemius medialis_53y 784 4 634 89 11 9 2859 STARD3,TCAP,PNMT,PGAP3,PPP1R1B,ERBB2,MIR4728
SE_00_005200134 chr17:39659006-39681340 Sample_00_0052 Heart left ventricle 3y 134 8 653 90 11 9 2850 STARD3,TCAP,PNMT,PGAP3,PPP1R1B,ERBB2,MIEN1,MIR4728
SE_02_092000443 chr17:39659026-39680988 Sample_02_0920 Heart left ventricle_DCM_LV1535 443 6 648 90 11 9 2843 STARD3,TCAP,PNMT,PGAP3,PPP1R1B,ERBB2,MIEN1,MIR4728
SE_00_003200210 chr17:39659064-39680796 Sample_00_0032 Psoas muscle psoas-muscle_30y 210 3 642 89 11 9 2838 STARD3,PGAP3,TCAP,PNMT,PPP1R1B,ERBB2,C17ORF37
SE_02_125000449 chr17:39659108-39680769 Sample_02_1250 Bone marrow RS4_11_AZD1775 _4h 449 9 641 89 11 9 2837 STARD3,TCAP,PNMT,PGAP3,PPP1R1B,ERBB2,MIEN1,MIR4728
SE_00_005700077 chr17:39659200-39681050 Sample_00_0057 Heart right ventricle 3y 77 17 642 89 11 9 2800 STARD3,TCAP,PNMT,PGAP3,PPP1R1B,ERBB2,MIEN1,MIR4728
SE_02_090700595 chr17:39659205-39680834 Sample_02_0907 Heart left ventricle_DCM_LV1223 595 6 636 89 11 9 2800 STARD3,TCAP,PNMT,PGAP3,PPP1R1B,ERBB2,MIEN1,MIR4728
SE_02_057601019 chr17:39659413-39684968 Sample_02_0576 Blood HEL_sgLKB1e2 1019 7 720 95 11 9 2844 STARD3,TCAP,PNMT,PGAP3,PPP1R1B,ERBB2,MIEN1,MIR4728
SE_02_036700204 chr17:39659796-39680597 Sample_02_0367 Skeletal muscle NS129 204 3 608 85 11 9 2672 STARD3,PGAP3,TCAP,PNMT,PPP1R1B,ERBB2,C17ORF37
SE_02_008600410 chr17:39661349-39681528 Sample_02_0086 Pancreas CAPAN1 410 1 575 81 10 9 2388 STARD3,PGAP3,TCAP,PNMT,PPP1R1B,ERBB2,C17ORF37
SE_02_108600780 chr17:39662515-39678422 Sample_02_1086 Mammary gland T47D_shCtrl_0hr 780 6 473 67 10 6 2283 STARD3,TCAP,PNMT,PGAP3,PPP1R1B,ERBB2,MIR4728
SE_04_000100735 chr17:39662574-39671285 Sample_04_0001 Blood heat shocked K562 735 1 276 23 4 6 1487 STARD3,TCAP,PNMT,PGAP3,PPP1R1B,ERBB2
SE_04_000200844 chr17:39662581-39671319 Sample_04_0002 Blood cold shocked K562 844 1 276 23 4 6 1489 STARD3,TCAP,PNMT,PGAP3,PPP1R1B,ERBB2
SE_02_058000842 chr17:39663114-39684739 Sample_02_0580 Blood HEL_sgSIK3e4 842 5 597 83 10 2 2220 STARD3,TCAP,PNMT,PGAP3,PPP1R1B,ERBB2,MIEN1,MIR4728
SE_02_038100473 chr17:39669252-39682240 Sample_02_0381 Heart purified cardiomyocyte WT 473 1 346 61 6 0 1148 PNMT,PGAP3,PPP1R1B,STARD3,ERBB2,C17ORF37,TCAP
SE_02_067100093 chr17:39671115-39680893 Sample_02_0671 Mammary gland breast cancer_DSG 93 1 254 57 6 0 826 PGAP3,PPP1R1B,ERBB2,PNMT,TCAP,STARD3,MIEN1,MIR4728
SE_02_082700555 chr17:39671632-39680494 Sample_02_0827 Stomach normal gastric 555 5 229 55 6 0 707 PGAP3,PPP1R1B,ERBB2,PNMT,TCAP,STARD3,MIR4728
SE_02_035400452 chr17:39671632-39681174 Sample_02_0354 Colon Colo205 452 1 244 56 6 0 707 PGAP3,PPP1R1B,STARD3,ERBB2,C17ORF37,PNMT,TCAP
SE_00_003601225 chr17:39671671-39681117 Sample_00_0036 Small intestine small-intestine_108days 1225 2 244 56 6 0 695 PGAP3,PPP1R1B,STARD3,ERBB2,C17ORF37,PNMT,TCAP
SE_00_002001389 chr17:39671684-39681146 Sample_00_0020 Large intestine large-intestine_108d 1389 2 244 56 6 0 690 PGAP3,PPP1R1B,STARD3,ERBB2,C17ORF37,PNMT,TCAP
SE_02_024100505 chr17:39671895-39680960 Sample_02_0241 Colon V456 505 2 234 55 6 0 648 PGAP3,PPP1R1B,STARD3,ERBB2,C17ORF37,PNMT,TCAP
SE_02_105100018 chr17:39673320-39680840 Sample_02_1051 Esophagus Eso26 18 1 195 48 4 0 323 PGAP3,PPP1R1B,ERBB2,PNMT,TCAP,STARD3,MIEN1,MIR4728
SE_02_067000105 chr17:39673809-39679170 Sample_02_0670 Mammary gland breast cancer FA 105 1 139 40 4 0 212 PGAP3,PPP1R1B,ERBB2,PNMT,TCAP,STARD3,MIR4728
Genomic distribution of SEs associated with PNMT
Genome Browser

The strength of the tissue affected by the gene

Expression of PNMT

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)