SEdb 3.0
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Super-enhancer overview

SE ID: SE_04_000200844
Species: Human
Data source: NGDC GSA
Biosample type: Cell line
Tissue type: Blood
Biosample name: cold shocked K562
Genomic region: chr17:39662581-39671319
Size: 8738
Super-enhancer rank 844
Number of SE elements: 1
ChIP density(Case|Control): 38846.5266|1153.416
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PNMT ;
ROSE Overlap STARD3 ; TCAP ; PNMT ; PGAP3 ;
ROSE Proximal PPP1R1B ; ERBB2 ;
ROSE Closest PNMT ;
Lasso ;
PreSTIGE ;
ABC KRT13 ;
BETA GRB7 ; ERBB2 ; PGAP3 ; PNMT ; NEUROD2 ; STARD3 ; MIEN1 ; MIR4728 ; PPP1R1B ; TCAP ;

Network diagram of super-enhancer and associated genes

Expression of SE_04_000200844 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers