SEdb 2.0
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  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000155087
Gene: ODF1 Gene type: protein_coding
Strand: + External links:
Genomic region: chr8:102551589-102561018 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_156700379 chr8:102504923-102557134 Sample_02_1567 iPSCs CiPSC 379 8 1519 175 8 69 71 ODF1,UBR5
SE_02_101500642 chr8:102504966-102558026 Sample_02_1015 Embryo H9_ Undifferentiated 642 13 1543 175 8 71 71 ODF1
SE_02_003600596 chr8:102504990-102569640 Sample_02_0036 Embryo H7 596 10 1911 204 12 89 190 ODF1,KLF10
SE_02_157000617 chr8:102505000-102544923 Sample_02_1570 iPSCs EiPSC 617 11 1126 136 5 43 0 ODF1,UBR5
SE_02_067900067 chr8:102505172-102541315 Sample_02_0679 Embryo H1 hESC-derived neural progenitor cells_Smad_24hr 67 9 1015 122 5 43 0 ODF1
SE_02_021000921 chr8:102511205-102547345 Sample_02_0210 Lung MRC-5_N_1DPT 921 7 1037 123 5 43 0 ODF1,UBR5
SE_02_021300078 chr8:102523062-102587729 Sample_02_0213 Burkitts lymphoma of the left maxilla Raji_JQ1 78 7 2039 186 10 95 190 ODF1
SE_02_078100286 chr8:102523525-102587243 Sample_02_0781 Lymphoma Pfeiffer_DMSO 286 15 2009 182 10 94 190 ODF1
SE_02_121800373 chr8:102523738-102541761 Sample_02_1218 Bone marrow Daudi 373 8 550 70 3 40 0 ODF1
SE_02_086200149 chr8:102525556-102542472 Sample_02_0862 Malignant rhaboid tumor TTC1240_SMARCB1 FL 149 2 507 63 2 38 0 ODF1
SE_01_005300444 chr8:102525592-102542380 Sample_01_0053 Haematopoietic and lymphoid tissue OCI-LY1 444 3 504 63 2 38 0 ODF1
SE_01_006700125 chr8:102525962-102540235 Sample_01_0067 Peritoneal effusion: derived from metastatic site: peritoneal cavity SUDHL6 125 1 423 55 2 37 0 ODF1
SE_02_028800119 chr8:102526023-102537167 Sample_02_0288 Tonsil CB5_H3K27Ac 119 2 333 40 2 33 0 ODF1,UBR5
SE_02_086400141 chr8:102526078-102542435 Sample_02_0864 Malignant rhaboid tumor TTC1240_SMARCB1_K364del 141 1 478 61 2 37 0 ODF1
SE_02_086500144 chr8:102526212-102566167 Sample_02_0865 Malignant rhaboid tumor TTC1240_SMARCB1_R377H 144 7 1194 126 8 79 190 ODF1
SE_02_130300638 chr8:102526273-102568466 Sample_02_1303 Lymphoma RL_tazemetostat 638 13 1280 131 9 83 190 ODF1
SE_02_137800951 chr8:102526358-102538814 Sample_02_1378 Pancreas Pancreatic_tumor_associated_fibroblasts_CAF08_untreated 951 9 363 48 2 37 0 ODF1
SE_02_086600168 chr8:102526443-102541854 Sample_02_0866 Malignant rhaboid tumor TTC1240_SMARCB1_delCC 168 3 447 57 2 36 0 ODF1,KLF10
SE_02_086300132 chr8:102526451-102563005 Sample_02_0863 Malignant rhaboid tumor TTC1240_empty 132 5 1109 113 7 77 190 ODF1
SE_02_157200610 chr8:102526500-102539079 Sample_02_1572 iPSCs FiPSC 610 5 367 48 2 32 0 ODF1,UBR5
SE_01_005500180 chr8:102527286-102540250 Sample_01_0055 Haematopoietic and lymphoid tissue OCI-LY7 180 2 372 51 2 30 0 ODF1
SE_02_099900618 chr8:102527484-102541801 Sample_02_0999 Lymphoma OCI-LY1_966 618 6 411 56 2 30 0 ODF1
SE_02_045300594 chr8:102527575-102544487 Sample_02_0453 Neuroblastoma SJNB3 594 2 482 64 2 30 0 ODF1
SE_01_009600229 chr8:102527589-102539842 Sample_01_0096 B-cell lymphoma DOHH2 229 2 355 48 2 30 0 ODF1
SE_02_012000128 chr8:102527810-102569137 Sample_02_0120 Haematopoietic and lymphoid tissue REC-1 128 4 1256 130 9 76 190 ODF1
SE_02_044800713 chr8:102527989-102538983 Sample_02_0448 Bone MNNG 713 4 320 46 2 30 0 ODF1,KLF10
SE_02_137600523 chr8:102527992-102538949 Sample_02_1376 Pancreas Pancreatic_tumor_associated_fibroblasts_B011C_untreated 523 7 320 46 2 30 0 ODF1,KLF10
SE_02_078200766 chr8:102528054-102538040 Sample_02_0782 Blood MEC1 766 1 289 40 2 30 0 ODF1
SE_01_004200218 chr8:102528061-102538296 Sample_01_0042 Haematopoietic and lymphoid tissue KMS-11 218 2 295 42 2 30 0 ODF1,KLF10
SE_02_017100516 chr8:102528062-102542514 Sample_02_0171 Lung IMR-90_proliferating 516 4 418 56 2 30 0 ODF1
SE_02_122200066 chr8:102528065-102537948 Sample_02_1222 Bone marrow KMS12 66 2 283 37 2 29 0 ODF1
SE_02_078400272 chr8:102528088-102569371 Sample_02_0784 Blood OSU-CLL 272 7 1257 129 9 76 190 ODF1
SE_02_137700707 chr8:102528103-102542172 Sample_02_1377 Pancreas Pancreatic_tumor_associated_fibroblasts_BF1_untreated 707 11 407 56 2 30 0 ODF1
SE_02_078300542 chr8:102528118-102538009 Sample_02_0783 Blood MEC2 542 2 286 39 2 30 0 ODF1
SE_02_006400894 chr8:102528234-102539640 Sample_02_0064 Embryo DN-Early_G1 894 3 338 47 2 30 0 ODF1,KLF10
SE_02_137400789 chr8:102528369-102538716 Sample_02_1374 Pancreas Pancreatic_tumor_associated_fibroblasts_B009B_untreated 789 9 309 45 2 30 0 ODF1
SE_02_122100599 chr8:102528418-102537743 Sample_02_1221 Bone marrow KMS11 599 6 275 36 2 29 0 ODF1
SE_02_067700296 chr8:102528439-102538708 Sample_02_0677 Embryo H1 hESC-derived neural progenitor cells_Smad_6hr 296 6 307 45 2 30 0 ODF1,KLF10
SE_02_137500596 chr8:102528447-102538934 Sample_02_1375 Pancreas Pancreatic_tumor_associated_fibroblasts_B0010A_untreated 596 8 313 46 2 30 0 ODF1,KLF10
SE_02_041700307 chr8:102528648-102538358 Sample_02_0417 Embryo H9_Null 307 2 289 42 2 30 0 ODF1,UBR5
SE_02_017500618 chr8:102528859-102542368 Sample_02_0175 Lung IMR-90_Etoposide 618 7 395 56 2 30 0 ODF1,KLF10
SE_02_126700784 chr8:102528904-102538661 Sample_02_1267 Bone Im-GCT-4072_G34W 784 4 287 45 2 28 0 ODF1
SE_02_126801065 chr8:102528957-102538093 Sample_02_1268 Bone Im-GCT-4072_G34W unedited_U3 1065 3 266 39 2 28 0 ODF1,KLF10
SE_02_058800629 chr8:102530449-102541651 Sample_02_0588 Cervix HeLa Kyoto_untreated 629 7 334 49 2 28 0 ODF1
SE_02_154900258 chr8:102531877-102541681 Sample_02_1549 Gastrointestinal Stromal GIST-430B 258 4 290 45 2 24 0 ODF1
SE_02_001100983 chr8:102534235-102538557 Sample_02_0011 Kidney A-498_wtVHL 983 1 130 25 1 24 0 ODF1,KLF10
SE_01_005800606 chr8:102534833-102539778 Sample_01_0058 Prostate PC-3 606 1 148 25 1 24 0 ODF1
SE_00_001200497 chr8:102535321-102544986 Sample_00_0012 Embryo H1-hESC 497 2 271 40 1 24 0 ODF1,KLF10
SE_01_002900656 chr8:102535407-102538594 Sample_01_0029 Lung fibroblast-of-lung 656 1 91 21 1 24 0 ODF1,KLF10
SE_01_005400080 chr8:102551940-102587055 Sample_01_0054 Haematopoietic and lymphoid tissue OCI-LY3 80 4 1139 81 5 33 144 ODF1
SE_02_032100696 chr8:102553126-102569195 Sample_02_0321 Peripheral blood MO1043_ICN1_HA_H3K27Ac_b 696 3 504 41 5 24 119 ODF1
SE_02_078300259 chr8:102553241-102587003 Sample_02_0783 Blood MEC2 259 6 1079 75 5 32 119 ODF1
SE_02_115700249 chr8:102554620-102586883 Sample_02_1157 Peripheral blood Day6 Plasmablast CD23- memory B cell_G9A-Inhibited 249 18 1032 64 4 30 119 ODF1
SE_02_115600544 chr8:102555034-102568519 Sample_02_1156 Peripheral blood Day6 Plasmablast CD23- memory B cell 544 7 412 28 4 22 119 ODF1
SE_02_149200618 chr8:102555495-102602678 Sample_02_1492 Peripheral blood CD34+ derived peripheral blood-derived mast cells 618 10 1426 91 4 31 119 ODF1,KLF10
SE_02_087500637 chr8:102555805-102602722 Sample_02_0875 Peripheral blood Peripheral blood-derived mast cells 637 13 1418 90 4 31 119 ODF1,KLF10
SE_02_104603119 chr8:102558161-102601941 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 3119 16 1331 88 4 29 119 ODF1,KLF10
SE_02_103602868 chr8:102558195-102620490 Sample_02_1036 Mammary gland HCC70_XY018 2868 19 1919 117 5 34 119 ODF1,KLF10
SE_02_104301787 chr8:102567534-102601668 Sample_02_1043 Peripheral blood Peripheral blood cells_CTCL1200 1787 13 1040 64 0 13 0 ODF1
SE_00_003101173 chr8:102575826-102586349 Sample_00_0031 Placenta placenta 1173 2 364 16 0 8 0 ODF1,KLF10
SE_02_067100209 chr8:102576486-102618118 Sample_02_0671 Mammary gland breast cancer_DSG 209 10 1263 68 1 16 0 KLF10,ODF1
SE_02_123400186 chr8:102576767-102628499 Sample_02_1234 Mammary gland T47D_Full 186 10 1566 84 2 19 0 KLF10,ODF1
SE_02_108900287 chr8:102577106-102603594 Sample_02_1089 Mammary gland T47D_shCtrl_shRING1B_45min 287 6 807 46 0 11 0 ODF1
SE_02_109200247 chr8:102577122-102603394 Sample_02_1092 Mammary gland T47D_shCtrl_24hr 247 6 801 45 0 11 0 ODF1,KLF10
SE_02_109300324 chr8:102577151-102603561 Sample_02_1093 Mammary gland T47D_shCtrl_shRING1B_24hr 324 6 806 46 0 11 0 ODF1,KLF10
SE_02_108800340 chr8:102577174-102603444 Sample_02_1088 Mammary gland T47D_shCtrl_45min 340 5 802 45 0 11 0 ODF1,KLF10
SE_02_146400296 chr8:102577176-102603950 Sample_02_1464 Ovary CAOV4 296 8 818 46 0 11 0 ODF1,KLF10
SE_02_146500380 chr8:102577703-102603278 Sample_02_1465 Ovary CAOV4cis 380 6 784 45 0 11 0 ODF1,KLF10
SE_02_098800941 chr8:102583511-102601912 Sample_02_0988 Blood K562_EPZ 941 7 508 33 0 8 0 ODF1,KLF10,KB-1980E6.3
SE_02_040300297 chr8:102584525-102618421 Sample_02_0403 Mammary gland T-47D_untreat 297 3 993 58 1 13 0 KLF10,ODF1
SE_02_136300319 chr8:102584656-102602437 Sample_02_1363 Blood Hudep2 319 6 491 33 0 8 0 ODF1
SE_02_076600443 chr8:102585092-102617905 Sample_02_0766 Ovary PEO1 443 6 950 56 1 13 0 KLF10,ODF1
SE_02_109000450 chr8:102599062-102603359 Sample_02_1090 Mammary gland T47D_shCtrl_8hr 450 1 125 4 0 0 0 ODF1
SE_02_109100510 chr8:102599243-102603287 Sample_02_1091 Mammary gland T47D_shCtrl_shRING1B_8hr 510 1 121 4 0 0 0 ODF1
SE_02_049600188 chr8:102599912-102602438 Sample_02_0496 Mammary gland C49R 188 1 69 3 0 0 0 ODF1
Genomic distribution of SEs associated with ODF1
Genome Browser

The strength of the tissue affected by the gene

Expression of ODF1

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)