SEdb 2.0
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  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000263514
Gene: MIR3668 Gene type: miRNA
Strand: + External links:
Genomic region: chr6:140205252-140205326 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_040800076 chr6:139839248-139890423 Sample_02_0408 Kidney G401_Dox 76 5 1361 43 5 279 126 MIR3668
SE_02_040900071 chr6:139845610-139890460 Sample_02_0409 Kidney G401_NoDox 71 4 1163 42 4 271 126 MIR3668
SE_01_005700141 chr6:139845788-139997811 Sample_01_0057 Pancreas duct PANC-1 141 21 4097 184 17 712 180 MIR3668
SE_02_033000363 chr6:139846238-139890281 Sample_02_0330 Endoderm MHG 363 7 1141 42 4 267 126 MIR3668,LOC645434
SE_01_006400500 chr6:139862212-139889676 Sample_01_0064 Brain: derived from metastatic site: supra-orbital area SK-N-MC 500 4 745 24 4 146 0 MIR3668
SE_02_012500374 chr6:139880486-139891014 Sample_02_0125 Embryo Embryonic-stem-cells_Primed 374 1 277 6 1 124 0 MIR3668,LOC645434
SE_00_001000790 chr6:139880599-139889978 Sample_00_0010 Embryo endodermal-cell 790 2 243 5 1 119 0 MIR3668,LOC645434
SE_02_006700598 chr6:139881788-139890758 Sample_02_0067 Embryo AzH-G2/M 598 1 235 3 1 110 0 MIR3668,LOC645434
SE_02_006500691 chr6:139881806-139890829 Sample_02_0065 Embryo KO2-Late_G1 691 2 236 3 1 109 0 MIR3668,LOC645434
SE_02_040800335 chr6:139917653-139944662 Sample_02_0408 Kidney G401_Dox 335 4 717 39 7 161 0 MIR3668
SE_02_040900243 chr6:139917695-139944668 Sample_02_0409 Kidney G401_NoDox 243 4 717 39 7 161 0 MIR3668
SE_02_041901039 chr6:139925345-139945087 Sample_02_0419 Pectoralis major muscle LHCN-M2_nodox 1039 6 510 31 7 125 0 MIR3668
SE_02_033000529 chr6:139955400-140003885 Sample_02_0330 Endoderm MHG 529 7 1296 41 1 230 54 MIR3668,LOC645434
SE_01_006400191 chr6:139959985-140004630 Sample_01_0064 Brain: derived from metastatic site: supra-orbital area SK-N-MC 191 6 1178 35 1 218 54 MIR3668
SE_02_040800061 chr6:139960014-140004036 Sample_02_0408 Kidney G401_Dox 61 6 1165 35 1 218 54 MIR3668
SE_01_008700332 chr6:139960038-139992874 Sample_01_0087 Thyroid gland thyroid-gland 332 3 879 26 1 153 54 MIR3668
SE_02_040900040 chr6:139960049-140004291 Sample_02_0409 Kidney G401_NoDox 40 6 1168 35 1 218 54 MIR3668
SE_02_011400282 chr6:139960306-140005721 Sample_02_0114 Mammary gland CAL51 282 14 1188 35 1 218 54 MIR3668
SE_02_003301106 chr6:139960566-139997605 Sample_02_0033 Pancreas pancreatic-islets-F 1106 6 969 27 1 153 54 MIR3668,LOC645434
SE_02_021000766 chr6:139961007-139991831 Sample_02_0210 Lung MRC-5_N_1DPT 766 6 827 22 1 136 54 MIR3668
SE_02_017201256 chr6:139963301-140003399 Sample_02_0172 Lung IMR-90_quiescent 1256 4 1065 32 1 190 54 MIR3668
SE_02_020900594 chr6:139964683-140003884 Sample_02_0209 Lung MRC-5_MRC5_1DPT 594 9 1042 29 1 185 54 MIR3668
SE_02_026300201 chr6:139964693-140004641 Sample_02_0263 Osteoblastic hFOB_undifferentiated 201 8 1054 29 1 185 54 MIR3668
SE_02_041900557 chr6:139964790-139997034 Sample_02_0419 Pectoralis major muscle LHCN-M2_nodox 557 14 849 22 1 131 54 MIR3668
SE_02_003900971 chr6:139965000-139991981 Sample_02_0039 Embryo AFG 971 3 726 18 1 120 54 MIR3668,LOC645434
SE_02_026200409 chr6:139965012-139985660 Sample_02_0262 Osteoblastic hFOB_JQ1_differentiated 409 4 557 16 0 104 54 MIR3668
SE_02_017300366 chr6:139966350-139985455 Sample_02_0173 Lung IMR-90_senescent 366 4 524 15 0 75 54 MIR3668
SE_01_005600635 chr6:139966891-140004042 Sample_01_0056 Bone osteoblast 635 6 986 28 1 155 54 MIR3668
SE_02_010800260 chr6:139967834-139984923 Sample_02_0108 Fallopian tube FT246 260 4 477 15 0 52 54 MIR3668
SE_00_003100786 chr6:139968095-139992154 Sample_00_0031 Placenta placenta 786 4 655 17 1 68 54 MIR3668,LOC645434
SE_02_026100440 chr6:139969203-139985565 Sample_02_0261 Osteoblastic hFOB_differentiated 440 1 443 15 0 51 54 MIR3668
SE_02_017500989 chr6:139970751-139991500 Sample_02_0175 Lung IMR-90_Etoposide 989 13 568 17 1 66 54 MIR3668
SE_02_035900915 chr6:139972037-139985284 Sample_02_0359 Colon Colo741 915 2 361 14 0 49 54 MIR3668,LOC645434
SE_02_009100423 chr6:139973512-140003159 Sample_02_0091 Umbilical cord umbilical-cord-derived-mesenchymal-stem-cells_Control_cycle_0 423 4 793 26 1 130 54 MIR3668
SE_02_003000087 chr6:139975888-139983891 Sample_02_0030 Kidney human kidney proximal tubule cells 87 3 238 9 0 45 54 MIR3668,LOC645434
SE_02_082800018 chr6:140028671-140236718 Sample_02_0828 Lung H1703 Control-infected 18 54 5024 95 7 754 272 MIR3668,LOC100507477,LOC103352541
SE_02_017300128 chr6:140032357-140097778 Sample_02_0173 Lung IMR-90_senescent 128 15 1499 45 2 468 211 MIR3668
SE_02_017200405 chr6:140039884-140084135 Sample_02_0172 Lung IMR-90_quiescent 405 8 1015 26 1 374 74 MIR3668
SE_02_017100991 chr6:140039908-140080601 Sample_02_0171 Lung IMR-90_proliferating 991 6 945 26 1 344 74 MIR3668
SE_02_020900336 chr6:140040151-140079765 Sample_02_0209 Lung MRC-5_MRC5_1DPT 336 11 921 26 1 334 74 MIR3668
SE_02_017500408 chr6:140040172-140079646 Sample_02_0175 Lung IMR-90_Etoposide 408 16 917 25 1 334 74 MIR3668
SE_02_031700608 chr6:140040532-140083968 Sample_02_0317 Neuroblastoma GICAN 608 6 1001 25 1 361 74 MIR3668
SE_02_007400267 chr6:140041562-140079869 Sample_02_0074 Other 90-8TL_PDJQ 267 6 894 23 1 313 74 MIR3668
SE_02_039500443 chr6:140041665-140080955 Sample_02_0395 Mammary gland BT-549 443 9 926 23 1 322 74 MIR3668,LOC645434
SE_02_030500269 chr6:140041770-140084471 Sample_02_0305 Neuroblastoma SH-EP 269 8 988 23 1 351 74 MIR3668
SE_02_028000257 chr6:140042067-140080247 Sample_02_0280 Mammary gland SUM159_DMSO_24h 257 5 892 22 1 317 74 MIR3668
SE_00_000301354 chr6:140042212-140081073 Sample_00_0003 Adrenal gland adrenal-gland_97d 1354 6 913 22 1 322 74 MIR3668
SE_02_026200141 chr6:140042447-140083971 Sample_02_0262 Osteoblastic hFOB_JQ1_differentiated 141 6 960 22 1 351 74 MIR3668
SE_02_041900478 chr6:140042449-140079755 Sample_02_0419 Pectoralis major muscle LHCN-M2_nodox 478 13 874 22 1 313 74 MIR3668
SE_02_026100100 chr6:140042471-140084201 Sample_02_0261 Osteoblastic hFOB_differentiated 100 4 960 22 1 351 74 MIR3668
SE_01_005600238 chr6:140042534-140084049 Sample_01_0056 Bone osteoblast 238 6 956 22 1 351 74 MIR3668
SE_01_001800171 chr6:140042641-140084000 Sample_01_0018 Submandibular Salivary Gland ACC112 171 6 954 22 1 350 74 MIR3668
SE_01_004500887 chr6:140042695-140063587 Sample_01_0045 Mammary gland mammary-epithelial-cell 887 4 472 14 1 220 0 MIR3668
SE_02_026300060 chr6:140042889-140083962 Sample_02_0263 Osteoblastic hFOB_undifferentiated 60 6 947 22 1 350 74 MIR3668
SE_01_001900588 chr6:140042916-140080168 Sample_01_0019 Brain and spinal cord astrocyte 588 6 869 22 1 312 74 MIR3668
SE_02_009100037 chr6:140042932-140080359 Sample_02_0091 Umbilical cord umbilical-cord-derived-mesenchymal-stem-cells_Control_cycle_0 37 6 873 22 1 319 74 MIR3668
SE_01_006300372 chr6:140042935-140079890 Sample_01_0063 Skeletal muscle skeletal-muscle-myoblast 372 5 863 22 1 311 74 MIR3668,LOC645434
SE_01_006400022 chr6:140043048-140108166 Sample_01_0064 Brain: derived from metastatic site: supra-orbital area SK-N-MC 22 9 1471 30 2 433 211 MIR3668
SE_02_008800109 chr6:140043450-140080137 Sample_02_0088 Umbilical cord umbilical-cord-derived-mesenchymal-stem-cells_SGA_cycle_0 109 5 861 22 1 300 74 MIR3668
SE_01_001700076 chr6:140043619-140063605 Sample_01_0017 Muscle A673 76 2 455 14 1 199 0 MIR3668,LOC645434
SE_02_039900264 chr6:140044035-140080789 Sample_02_0399 Mammary gland SUM159PT-BT-474 264 6 867 22 1 293 74 MIR3668
SE_02_026400336 chr6:140044170-140080174 Sample_02_0264 Skeletal muscle 7250-empty 336 9 845 22 1 285 74 MIR3668,LOC645434
SE_02_040800079 chr6:140046738-140108905 Sample_02_0408 Kidney G401_Dox 79 13 1398 29 2 399 211 MIR3668
SE_02_040900075 chr6:140046933-140108887 Sample_02_0409 Kidney G401_NoDox 75 13 1389 29 2 393 211 MIR3668
SE_02_028200432 chr6:140049963-140079835 Sample_02_0282 Lung IMR-90 432 8 694 16 0 246 74 MIR3668
SE_02_010800359 chr6:140050011-140080198 Sample_02_0108 Fallopian tube FT246 359 5 700 16 0 247 74 MIR3668
SE_02_011100340 chr6:140050179-140084017 Sample_02_0111 Ovaries IOE4 340 5 774 16 0 275 74 MIR3668
SE_02_041400021 chr6:140050384-140078765 Sample_02_0414 Foreskin BJEL 21 7 657 15 0 208 74 MIR3668
SE_02_024300178 chr6:140050498-140083906 Sample_02_0243 Foreskin foreskin_HFFs 178 5 770 15 0 258 74 MIR3668
SE_02_009300495 chr6:140051560-140080800 Sample_02_0093 Umbilical cord umbilical-cord-derived-mesenchymal-stem-cells_Control_cycle_6 495 5 688 13 0 224 74 MIR3668
SE_02_011400253 chr6:140051843-140109772 Sample_02_0114 Mammary gland CAL51 253 17 1304 21 1 341 211 MIR3668
SE_02_009200151 chr6:140051914-140083800 Sample_02_0092 Umbilical cord umbilical-cord-derived-mesenchymal-stem-cells_Control_cycle_3 151 8 737 13 0 252 74 MIR3668
SE_02_023000082 chr6:140052068-140079749 Sample_02_0230 Umbilical cord ID60 82 10 647 13 0 206 74 MIR3668,LOC645434
SE_02_022900400 chr6:140052102-140071300 Sample_02_0229 Umbilical cord ID01 400 4 427 10 0 132 74 MIR3668,LOC645434
SE_02_003000161 chr6:140060216-140071248 Sample_02_0030 Kidney human kidney proximal tubule cells 161 3 243 6 0 43 74 MIR3668,LOC645434
SE_02_008900274 chr6:140061282-140080279 Sample_02_0089 Umbilical cord umbilical-cord-derived-mesenchymal-stem-cells_SGA_cycle_3 274 4 456 9 0 126 74 MIR3668
SE_02_063600108 chr6:140169548-140186372 Sample_02_0636 Skin BJ5ta 108 2 423 7 0 50 0 MIR3668
SE_02_060500099 chr6:140169911-140227959 Sample_02_0605 Skin Skin Fibroblast_DMSO 99 14 1416 19 2 131 22 MIR3668
SE_02_086901049 chr6:140170732-140185076 Sample_02_0869 Fibroblast VH10_NO_UV 1049 10 363 7 0 50 0 MIR3668
SE_02_026300733 chr6:140173050-140185795 Sample_02_0263 Osteoblastic hFOB_undifferentiated 733 2 321 4 0 50 0 MIR3668
SE_02_060600175 chr6:140173414-140209996 Sample_02_0606 Skin Skin Fibroblast_Nutlin3A 175 8 912 9 1 93 22 MIR3668
SE_02_063700367 chr6:140173712-140185490 Sample_02_0637 Fibroblast fibroblast_WT_GM07492 367 9 294 3 0 50 0 MIR3668
SE_02_157101015 chr6:140173843-140185370 Sample_02_1571 Fibroblast Fibroblast cells 1015 4 289 3 0 50 0 MIR3668
SE_02_154500084 chr6:140201536-140239154 Sample_02_1545 Gastrointestinal Stromal GIST-T1/816 84 9 932 15 1 102 22 MIR3668
SE_02_062900526 chr6:140201545-140210681 Sample_02_0629 Gastrointestinal Stromal GIST-T1_DMSO 526 2 215 4 0 42 22 MIR3668
SE_02_154200176 chr6:140202471-140210357 Sample_02_1542 Gastrointestinal Stromal GIST-T1 176 1 178 4 0 41 22 MIR3668
SE_02_075201267 chr6:140256265-140264373 Sample_02_0752 Embryo ES-derived progenitors_DE_wild type 1267 1 233 1 0 5 0 MIR3668,LOC103352541
SE_02_056000524 chr6:140257124-140270449 Sample_02_0560 iPSCs FX52_Cas9-inactive Tet1_CGG sgRNA 524 9 368 2 0 11 0 MIR3668,LOC103352541
SE_02_148300668 chr6:140275653-140288655 Sample_02_1483 Bone RD-ES 668 6 304 8 0 38 0 MIR3668
SE_02_148500932 chr6:140277563-140298630 Sample_02_1485 Bone SK-ES-1 932 6 488 12 0 24 0 MIR3668
SE_02_148600635 chr6:140282600-140288724 Sample_02_1486 Bone SK-N-MC 635 2 150 4 0 21 0 MIR3668
SE_01_006400391 chr6:140282640-140288607 Sample_01_0064 Brain: derived from metastatic site: supra-orbital area SK-N-MC 391 1 141 4 0 21 0 MIR3668
SE_02_083000112 chr6:140339907-140403632 Sample_02_0830 Lung H1703 SMARCA2-infected 112 9 1543 48 0 154 0 MIR3668
SE_02_082900155 chr6:140340221-140371900 Sample_02_0829 Lung H1703 SMARCA4-infected 155 6 740 18 0 81 0 MIR3668
SE_02_060500100 chr6:140342603-140403849 Sample_02_0605 Skin Skin Fibroblast_DMSO 100 22 1484 47 0 154 0 MIR3668
SE_02_049900151 chr6:140342806-140403230 Sample_02_0499 Fetal lung IMR90 IR Senescence 151 30 1466 46 0 154 0 MIR3668
SE_02_126301665 chr6:140343000-140348732 Sample_02_1263 Bone Im-GCT-4072_G34W unedited 1665 1 144 5 0 38 0 MIR3668
SE_02_063600025 chr6:140343372-140403442 Sample_02_0636 Skin BJ5ta 25 26 1457 46 0 154 0 MIR3668
SE_02_156901493 chr6:140343764-140347986 Sample_02_1569 Endothelial Endothelial cells 1493 1 114 4 0 35 0 MIR3668
SE_02_021000296 chr6:140346256-140395608 Sample_02_0210 Lung MRC-5_N_1DPT 296 7 1169 36 0 100 0 MIR3668
SE_02_060600250 chr6:140365738-140403433 Sample_02_0606 Skin Skin Fibroblast_Nutlin3A 250 14 936 32 0 81 0 MIR3668
SE_02_026300276 chr6:140366106-140403688 Sample_02_0263 Osteoblastic hFOB_undifferentiated 276 8 934 32 0 81 0 MIR3668
SE_02_026100452 chr6:140366219-140403786 Sample_02_0261 Osteoblastic hFOB_differentiated 452 6 933 32 0 81 0 MIR3668
SE_02_026200615 chr6:140366338-140403251 Sample_02_0262 Osteoblastic hFOB_JQ1_differentiated 615 6 913 32 0 81 0 MIR3668
SE_02_050000982 chr6:140366567-140403113 Sample_02_0500 Fetal lung IMR90_#2 982 16 907 32 0 81 0 MIR3668
SE_02_049800390 chr6:140371701-140402954 Sample_02_0498 Fetal lung IMR90 Senescent_1 390 11 779 29 0 73 0 MIR3668
SE_02_105801191 chr6:140433968-140448112 Sample_02_1058 Bone A673_SA2 Rescue 1191 5 335 6 0 28 0 MIR3668
SE_02_026100305 chr6:140434380-140465614 Sample_02_0261 Osteoblastic hFOB_differentiated 305 4 721 11 0 90 0 MIR3668
SE_02_038200719 chr6:140435106-140449783 Sample_02_0382 Heart purified cardiomyocyte G296S mutants 719 1 346 5 0 29 0 MIR3668
SE_02_026300199 chr6:140435125-140465491 Sample_02_0263 Osteoblastic hFOB_undifferentiated 199 4 700 11 0 90 0 MIR3668
SE_01_002300456 chr6:140435469-140449377 Sample_01_0023 Embryo cardiac-muscle-cell 456 3 326 5 0 29 0 MIR3668,LOC645434
SE_02_055700366 chr6:140435757-140447143 Sample_02_0557 iPSCs WT hiPSC#1 366 2 262 5 0 25 0 MIR3668
SE_02_026200965 chr6:140459936-140465547 Sample_02_0262 Osteoblastic hFOB_JQ1_differentiated 965 1 128 1 0 39 0 MIR3668
SE_02_026300937 chr6:140480492-140495693 Sample_02_0263 Osteoblastic hFOB_undifferentiated 937 3 355 4 0 17 0 MIR3668
SE_02_020901323 chr6:140527164-140547156 Sample_02_0209 Lung MRC-5_MRC5_1DPT 1323 5 481 10 4 55 0 MIR3668
SE_02_026300433 chr6:140534944-140548872 Sample_02_0263 Osteoblastic hFOB_undifferentiated 433 1 338 4 3 49 0 MIR3668
SE_02_026100653 chr6:140534959-140549610 Sample_02_0261 Osteoblastic hFOB_differentiated 653 2 357 4 3 49 0 MIR3668
SE_02_013800172 chr6:140535949-140543186 Sample_02_0138 Brain RT172 172 1 168 1 1 41 0 MIR3668
SE_02_026200682 chr6:140535989-140547293 Sample_02_0262 Osteoblastic hFOB_JQ1_differentiated 682 2 283 4 3 49 0 MIR3668
SE_02_009100634 chr6:140536721-140539905 Sample_02_0091 Umbilical cord umbilical-cord-derived-mesenchymal-stem-cells_Control_cycle_0 634 1 84 0 0 24 0 MIR3668
SE_02_026300654 chr6:140564480-140574959 Sample_02_0263 Osteoblastic hFOB_undifferentiated 654 1 239 13 2 38 0 MIR3668
SE_02_020900549 chr6:140565790-140623815 Sample_02_0209 Lung MRC-5_MRC5_1DPT 549 9 1434 55 2 56 0 MIR3668
SE_02_038200786 chr6:140631696-140643140 Sample_02_0382 Heart purified cardiomyocyte G296S mutants 786 1 305 19 0 36 0 MIR3668
SE_02_026300676 chr6:140844087-140859875 Sample_02_0263 Osteoblastic hFOB_undifferentiated 676 4 424 36 2 56 0 MIR3668
SE_02_026100861 chr6:140844770-140860143 Sample_02_0261 Osteoblastic hFOB_differentiated 861 3 411 33 2 56 0 MIR3668
SE_02_028000504 chr6:140844932-140860890 Sample_02_0280 Mammary gland SUM159_DMSO_24h 504 1 426 32 2 56 0 MIR3668
SE_02_021001088 chr6:140853639-140883296 Sample_02_0210 Lung MRC-5_N_1DPT 1088 7 789 58 4 86 0 MIR3668
Genomic distribution of SEs associated with MIR3668
Genome Browser

The strength of the tissue affected by the gene

Expression of MIR3668

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)