SEdb 2.0
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  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000105323
Gene: HNRNPUL1 Gene type: protein_coding
Strand: + External links:
Genomic region: chr19:41262496-41307787 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_031700170 chr19:41217511-41268228 Sample_02_0317 Neuroblastoma GICAN 170 6 1447 102 2 293 2951 HNRNPUL1,AXL,CYP2S1,CCDC97
SE_02_017200432 chr19:41217676-41277518 Sample_02_0172 Lung IMR-90_quiescent 432 13 1707 117 2 322 3194 HNRNPUL1,AXL,CYP2S1,CCDC97
SE_02_158300149 chr19:41220871-41273060 Sample_02_1583 Fetal lung IMR90_empty_GM 149 19 1476 108 1 267 2755 AXL,HNRNPUL1,CYP2S1,CCDC97
SE_02_017100832 chr19:41248217-41276991 Sample_02_0171 Lung IMR-90_proliferating 832 4 767 56 0 164 1781 HNRNPUL1,AXL,CCDC97
SE_02_101700798 chr19:41249267-41268750 Sample_02_1017 Embryo H9_Mesendoderm 24h_Hydroxyurea 798 2 518 42 0 130 1453 AXL,HNRNPUL1,CCDC97
SE_02_095001195 chr19:41252352-41273425 Sample_02_0950 Umbilical vein HUVEC_WT 1195 4 552 38 0 132 1507 AXL,HNRNPUL1,CCDC97
SE_02_046601217 chr19:41252449-41276932 Sample_02_0466 Adipose visceral adipocytes 1217 4 635 42 0 144 1615 AXL,HNRNPUL1,CCDC97
SE_02_116700553 chr19:41253322-41267752 Sample_02_1167 Biliary H69_TGF Vehicle_1 553 2 358 27 0 106 1219 AXL,HNRNPUL1,CCDC97
SE_02_082600968 chr19:41253926-41270281 Sample_02_0826 Stomach gastric tumor 968 8 421 32 0 117 1174 AXL,HNRNPUL1,CCDC97
SE_02_028400377 chr19:41259451-41268067 Sample_02_0284 Pelvis patient 119 377 2 191 13 0 95 893 HNRNPUL1,AXL,CCDC97
SE_02_104801388 chr19:41259479-41270316 Sample_02_1048 Peripheral blood CD4+ cell_UNTREATED 1388 2 265 17 0 103 946 AXL,HNRNPUL1,CCDC97
SE_02_116900638 chr19:41259689-41268782 Sample_02_1169 Biliary H69_TGF beta_16h_2 638 3 214 14 0 98 901 AXL,HNRNPUL1,CCDC97
SE_02_145100314 chr19:41259851-41267359 Sample_02_1451 Arter pulmonary arterial smooth muscle cells_PAH1_sictrl 314 3 165 10 0 70 799 AXL,HNRNPUL1,CCDC97
SE_02_081100896 chr19:41259903-41267348 Sample_02_0811 Thyroid BCPAP 896 2 162 10 0 69 785 AXL,HNRNPUL1,CCDC97
SE_03_001400475 chr19:41260518-41268651 Sample_03_0014 Lung A549_dexamethasone_2h 475 1 187 14 0 85 754 HNRNPUL1,AXL,CCDC97
SE_03_001300992 chr19:41260532-41267983 Sample_03_0013 Lung A549 992 1 158 12 0 77 690 HNRNPUL1,AXL,CCDC97
SE_00_000900455 chr19:41260707-41268064 Sample_00_0009 Blood CD8-positive-alpha-beta-T-cell 455 1 159 12 0 77 672 HNRNPUL1,AXL,CCDC97
SE_01_001200110 chr19:41260837-41268238 Sample_01_0012 Lung A549_dexamethasone_1h 110 1 162 13 0 78 688 HNRNPUL1,AXL,CCDC97
SE_00_000700196 chr19:41260932-41268462 Sample_00_0007 Blood naive thymus-derived CD4-positive,alpha-beta T cell 196 1 170 13 0 85 714 HNRNPUL1,AXL,CCDC97
SE_02_013100810 chr19:41260994-41268250 Sample_02_0131 Lung 1015_PT 810 1 160 13 0 78 684 HNRNPUL1,AXL,CCDC97
SE_02_013200653 chr19:41261019-41268570 Sample_02_0132 Lung 1015_CL 653 1 174 13 0 84 719 HNRNPUL1,AXL,CCDC97
SE_02_017900340 chr19:41261031-41268441 Sample_02_0179 Urinary bladder T24 340 1 168 13 0 84 705 HNRNPUL1,AXL,CCDC97
SE_00_000800397 chr19:41261061-41268058 Sample_00_0008 Blood CD4-positive-alpha-beta-memory-T-cell 397 1 149 12 0 75 653 HNRNPUL1,AXL,CCDC97
SE_01_008501386 chr19:41261116-41267289 Sample_01_0085 Stomach stomach 1386 1 128 9 0 66 651 HNRNPUL1,AXL,CCDC97
SE_00_002700473 chr19:41261121-41267639 Sample_00_0027 Blood natural-killer-cell 473 1 136 9 0 71 651 HNRNPUL1,AXL,CCDC97
SE_01_008401315 chr19:41261131-41267933 Sample_01_0084 Spleen spleen 1315 1 143 11 0 75 651 HNRNPUL1,AXL,CCDC97
SE_00_004400738 chr19:41261163-41267914 Sample_00_0044 Cord blood T-cell 738 1 142 11 0 72 651 HNRNPUL1,AXL,CCDC97
SE_02_146700573 chr19:41261217-41268527 Sample_02_1467 Blood HUDEP-2_LRFKO 573 2 165 12 0 83 702 AXL,HNRNPUL1,CCDC97
SE_00_003900624 chr19:41261223-41266144 Sample_00_0039 Spleen spleen_3y 624 2 99 8 0 66 647 HNRNPUL1,AXL,CCDC97
SE_02_003200816 chr19:41261298-41267435 Sample_02_0032 Pancreas pancreatic-islets-M 816 2 130 9 0 66 642 HNRNPUL1,AXL,CCDC97
SE_02_040100438 chr19:41261369-41268004 Sample_02_0401 Mammary gland SUM159PT-T47D 438 1 141 11 0 75 634 HNRNPUL1,AXL,CCDC97
SE_02_146800277 chr19:41261406-41268410 Sample_02_1468 Blood HUDEP-2_WT 277 1 157 11 0 83 673 AXL,HNRNPUL1,CCDC97
SE_02_002600197 chr19:41261415-41267686 Sample_02_0026 Blood CD4donorE 197 3 130 8 0 71 631 HNRNPUL1,AXL,CCDC97
SE_02_037200625 chr19:41261422-41266739 Sample_02_0372 Skeletal muscle RMS008 625 1 107 8 0 66 631 HNRNPUL1,AXL,CCDC97
SE_02_003900653 chr19:41261442-41268214 Sample_02_0039 Embryo AFG 653 1 146 11 0 76 651 HNRNPUL1,AXL,CCDC97
SE_02_039500648 chr19:41261458-41267650 Sample_02_0395 Mammary gland BT-549 648 1 129 8 0 71 629 HNRNPUL1,AXL,CCDC97
SE_02_002200338 chr19:41261479-41266213 Sample_02_0022 Blood CD8donorA 338 3 94 7 0 66 627 HNRNPUL1,AXL,CCDC97
SE_00_002500787 chr19:41261549-41267012 Sample_00_0025 Muscle of leg muscle-of-leg 787 2 113 8 0 66 617 HNRNPUL1,AXL,CCDC97
SE_02_146600233 chr19:41261595-41267163 Sample_02_1466 Blood HUDEP-2_BCL11AKO 233 1 117 8 0 65 603 AXL,HNRNPUL1,CCDC97
SE_01_003700772 chr19:41261600-41266964 Sample_01_0037 Liver hepatocyte 772 1 111 8 0 65 601 HNRNPUL1,AXL,CCDC97
SE_02_033700205 chr19:41261665-41267758 Sample_02_0337 Haematopoietic and lymphoid tissue MV411_untreat 205 1 127 8 0 70 587 HNRNPUL1,AXL,CCDC97
SE_02_014800258 chr19:41261694-41266935 Sample_02_0148 Blood CD8_T_cells 258 1 106 8 0 65 578 HNRNPUL1,AXL,CCDC97
SE_02_035800501 chr19:41261704-41266827 Sample_02_0358 Colon LS180 501 1 103 8 0 65 577 HNRNPUL1,AXL,CCDC97
SE_02_025600560 chr19:41261705-41267819 Sample_02_0256 Peripheral blood MV411 560 1 128 8 0 70 577 HNRNPUL1,AXL,CCDC97
SE_02_043100485 chr19:41261732-41267923 Sample_02_0431 Peripheral blood CD34+HSPC-derived-erythroid-precursors 485 1 132 10 0 74 571 HNRNPUL1,AXL,CCDC97
SE_02_004001202 chr19:41261749-41266422 Sample_02_0040 Embryo PFG 1202 1 93 7 0 65 571 HNRNPUL1,AXL,CCDC97
SE_02_014400481 chr19:41261750-41267770 Sample_02_0144 Peripheral blood MV411_DMSO 481 1 124 8 0 70 571 HNRNPUL1,AXL,CCDC97
SE_02_103400340 chr19:41261763-41267861 Sample_02_1034 Blood AML cell 340 1 128 8 0 70 571 AXL,HNRNPUL1,CCDC97
SE_02_043600378 chr19:41261770-41267312 Sample_02_0436 Kidney HEK293A_empty-vector_DMSO_6h 378 1 117 8 0 65 571 HNRNPUL1,CCDC97,AXL
SE_02_029300244 chr19:41261771-41267215 Sample_02_0293 Pancreatic L3-6_4SC-202 244 1 115 8 0 65 571 HNRNPUL1,CCDC97,AXL
SE_02_012500475 chr19:41261771-41268095 Sample_02_0125 Embryo Embryonic-stem-cells_Primed 475 1 135 10 0 74 575 HNRNPUL1,CCDC97,AXL
SE_02_016700475 chr19:41261775-41267236 Sample_02_0167 Mammary gland HCC1954_LCC2 475 1 115 8 0 65 571 HNRNPUL1,CCDC97,AXL
SE_00_002001283 chr19:41261786-41267127 Sample_00_0020 Large intestine large-intestine_108d 1283 1 114 8 0 65 569 HNRNPUL1,CCDC97,AXL
SE_00_002600806 chr19:41261826-41266316 Sample_00_0026 Muscle of trunk muscle-of-trunk 806 1 89 7 0 65 562 HNRNPUL1,CCDC97,AXL
SE_00_004000628 chr19:41261869-41266342 Sample_00_0040 Spleen spleen_30y 628 2 88 7 0 65 550 HNRNPUL1,CCDC97,AXL
SE_02_036900685 chr19:41261869-41267220 Sample_02_0369 Skeletal muscle RD 685 1 113 8 0 65 550 HNRNPUL1,CCDC97,AXL
SE_02_037900685 chr19:41261869-41267220 Sample_02_0379 Skeletal muscle RD-Fusion-Negative-Rhabdomyosarcoma 685 1 113 8 0 65 550 HNRNPUL1,CCDC97,AXL
SE_02_143100384 chr19:41261879-41267813 Sample_02_1431 Blood T cell 384 1 125 8 0 70 549 HNRNPUL1,AXL,CCDC97
SE_01_003900666 chr19:41261896-41267966 Sample_01_0039 Haematopoietic and lymphoid tissue bone marrow K562 666 1 129 9 0 74 549 HNRNPUL1,CCDC97,AXL,CTC-43510.3,CYP2S1,EXOSC5,TGFB1,TE91
SE_00_003601029 chr19:41261901-41267056 Sample_00_0036 Small intestine small-intestine_108days 1029 1 108 7 0 65 549 HNRNPUL1,CCDC97,AXL
SE_02_035900527 chr19:41261902-41267769 Sample_02_0359 Colon Colo741 527 1 121 7 0 70 549 HNRNPUL1,CCDC97,AXL
SE_02_035500351 chr19:41261925-41267223 Sample_02_0355 Colon HCT15 351 1 112 7 0 65 548 HNRNPUL1,CCDC97,AXL
SE_02_058100195 chr19:41261935-41267133 Sample_02_0581 Blood MOLM13_empty_HG 195 1 111 7 0 65 548 HNRNPUL1,AXL,CCDC97
SE_02_058200214 chr19:41261946-41267325 Sample_02_0582 Blood MOLM13_SIK3TQ_HG 214 1 114 7 0 65 547 HNRNPUL1,AXL,CCDC97
SE_02_073900700 chr19:41261956-41268441 Sample_02_0739 Blood Nalm6 700 2 147 10 0 82 596 HNRNPUL1,AXL,CCDC97
SE_02_028600332 chr19:41261965-41267330 Sample_02_0286 Liver HuH7_IL-1alpha_1h 332 1 114 7 0 65 547 HNRNPUL1,CCDC97,AXL
SE_02_001700582 chr19:41261968-41266434 Sample_02_0017 Embryo H9_ESC 582 2 88 6 0 65 547 HNRNPUL1,CCDC97,AXL
SE_02_037500367 chr19:41261971-41266953 Sample_02_0375 Skeletal muscle RMS216 367 1 103 7 0 65 547 HNRNPUL1,CCDC97,AXL
SE_02_096800459 chr19:41261975-41266776 Sample_02_0968 Brain H3.3K27M_pcGBM2p18_cells 459 1 96 7 0 65 547 HNRNPUL1,AXL,CCDC97
SE_02_103000586 chr19:41262024-41267167 Sample_02_1030 Colon DKO 586 1 106 7 0 65 547 HNRNPUL1,AXL,CCDC97
SE_02_127300955 chr19:41262056-41267965 Sample_02_1273 Cervix HeLa 955 1 124 9 0 74 547 HNRNPUL1,AXL,CCDC97
SE_02_134900467 chr19:41262063-41265622 Sample_02_1349 Leukophereses leukophereses_p411 467 1 72 6 0 62 547 HNRNPUL1,AXL,CCDC97
SE_02_121200622 chr19:41262069-41267482 Sample_02_1212 Brain GBM30 622 1 114 7 0 65 547 HNRNPUL1,AXL,CCDC97
SE_02_061701222 chr19:41262085-41266859 Sample_02_0617 HSPC FL CD34+CD38-/lowCD90+ HSPC 1222 1 93 5 0 65 547 HNRNPUL1,AXL,CCDC97
SE_02_004600380 chr19:41262094-41266304 Sample_02_0046 Embryo endodermal CyT49_ES_D10 380 1 81 4 0 65 547 HNRNPUL1,CCDC97,AXL
SE_01_003300247 chr19:41262120-41266967 Sample_01_0033 Embryo H9 247 2 99 5 0 65 547 HNRNPUL1,CCDC97,AXL
SE_02_134100265 chr19:41262179-41269861 Sample_02_1341 Blood MV411 265 3 185 11 0 82 610 HNRNPUL1,AXL,CCDC97
SE_02_004800651 chr19:41262229-41266256 Sample_02_0048 Embryo endodermal CyT49_HE 651 1 78 4 0 65 547 HNRNPUL1,CCDC97,AXL
SE_02_143000314 chr19:41262229-41266360 Sample_02_1430 Blood Kasumi-3_mock-infected 314 1 80 4 0 65 547 HNRNPUL1,AXL,CCDC97
SE_02_009300562 chr19:41262246-41267183 Sample_02_0093 Umbilical cord umbilical-cord-derived-mesenchymal-stem-cells_Control_cycle_6 562 1 102 5 0 65 547 HNRNPUL1,CCDC97,AXL
SE_02_025500375 chr19:41262256-41267370 Sample_02_0255 Haematopoietic and lymphoid tissue MOLM13 375 1 107 5 0 65 547 HNRNPUL1,CCDC97,AXL
SE_02_001900562 chr19:41262258-41266377 Sample_02_0019 Embryo Neural crest cells 562 2 80 4 0 65 547 HNRNPUL1,CCDC97,AXL
SE_02_003801249 chr19:41262261-41266412 Sample_02_0038 Embryo DE 1249 1 80 4 0 65 547 HNRNPUL1,CCDC97,AXL
SE_02_028500394 chr19:41262312-41267143 Sample_02_0285 Liver HuH7_untreat 394 1 100 5 0 65 542 HNRNPUL1,CCDC97,AXL
SE_02_004500440 chr19:41262323-41266317 Sample_02_0045 Embryo endodermal CyT49_ES_D7 440 2 76 4 0 65 540 HNRNPUL1,CCDC97,AXL
SE_02_033001037 chr19:41262336-41266309 Sample_02_0330 Endoderm MHG 1037 1 76 4 0 65 537 HNRNPUL1,CCDC97,AXL
SE_02_003601642 chr19:41262360-41266172 Sample_02_0036 Embryo H7 1642 1 75 4 0 65 529 HNRNPUL1,CCDC97,AXL
SE_02_068800111 chr19:41262436-41267425 Sample_02_0688 Lung NCI-H211_no infection 111 2 107 5 0 64 511 HNRNPUL1,AXL,CCDC97
SE_02_135000649 chr19:41262453-41266908 Sample_02_1350 Leukophereses leukophereses_p456 649 1 89 5 0 64 507 HNRNPUL1,AXL,CCDC97
SE_02_057700238 chr19:41262461-41267597 Sample_02_0577 Blood MOLM13_empty 238 2 109 5 0 69 507 HNRNPUL1,AXL,CCDC97
SE_02_057800169 chr19:41262485-41267280 Sample_02_0578 Blood MOLM-13_sgSIK3e4 169 2 101 5 0 63 503 HNRNPUL1,AXL,CCDC97
SE_02_057500186 chr19:41262487-41267179 Sample_02_0575 Blood MOLM13_sgLKB1e2 186 1 100 5 0 63 503 HNRNPUL1,AXL,CCDC97
SE_02_057400209 chr19:41262491-41267401 Sample_02_0574 Blood MOLM-13_sgNeg2 209 1 107 5 0 62 501 HNRNPUL1,AXL,CCDC97
SE_02_068200539 chr19:41262513-41267071 Sample_02_0682 Blood Kasumi-1 539 1 99 5 0 62 499 HNRNPUL1,AXL,CCDC97
SE_02_116200438 chr19:41262532-41270357 Sample_02_1162 Stomach YCC11 438 4 198 12 0 77 554 HNRNPUL1,AXL,CCDC97
SE_02_082000316 chr19:41262565-41266328 Sample_02_0820 Haematopoietic and lymphoid tissue SET-2_WT_DMSO 316 1 76 4 0 55 486 HNRNPUL1,AXL,CCDC97
SE_02_143300934 chr19:41264014-41267744 Sample_02_1433 Bone A673 STAG2 null 934 2 79 3 0 43 391 HNRNPUL1,AXL,CCDC97
SE_02_143200871 chr19:41264098-41267632 Sample_02_1432 Bone A673 STAG2 WT 871 1 78 3 0 43 380 HNRNPUL1,AXL,CCDC97
SE_02_066001071 chr19:41264099-41267425 Sample_02_0660 Mammary gland MCF10DCIS 1071 1 75 3 0 38 380 HNRNPUL1,AXL,CCDC97
SE_02_101600808 chr19:41264112-41267914 Sample_02_1016 Embryo H9_Mesendoderm_24h 808 1 83 5 0 44 379 HNRNPUL1,AXL,CCDC97
SE_02_055500420 chr19:41264117-41267858 Sample_02_0555 Other HAP1_WT 420 1 80 3 0 42 378 HNRNPUL1,AXL,CCDC97
SE_02_001400444 chr19:41264118-41266313 Sample_02_0014 Liver HepG2_shBRG1 444 1 42 2 0 37 378 HNRNPUL1,CCDC97,AXL
SE_02_083300854 chr19:41264128-41276976 Sample_02_0833 Bone marrow TEX-HIST1H3F-K27I-2-Rx_cells 854 3 338 19 0 75 642 HNRNPUL1,AXL,CCDC97
SE_02_057601288 chr19:41264144-41267735 Sample_02_0576 Blood HEL_sgLKB1e2 1288 2 76 3 0 40 376 HNRNPUL1,AXL,CCDC97
SE_02_083600768 chr19:41264148-41267685 Sample_02_0836 Bone marrow TEX-HIST1H3H-WT-Rx_cells 768 1 76 3 0 40 376 HNRNPUL1,AXL,CCDC97
SE_02_058001118 chr19:41264148-41267865 Sample_02_0580 Blood HEL_sgSIK3e4 1118 1 80 3 0 40 376 HNRNPUL1,AXL,CCDC97
SE_02_111400046 chr19:41264179-41267270 Sample_02_1114 Embryonic kidney HEK293 46 1 67 3 0 34 363 HNRNPUL1,AXL,CCDC97,BCKDHA,TMEM91,ATP5SL,EXOSC5,B9D2
SE_02_148000892 chr19:41264193-41267894 Sample_02_1480 Bone MHH-ES-1 892 1 80 5 0 40 362 HNRNPUL1,AXL,CCDC97
SE_02_138100195 chr19:41264193-41274223 Sample_02_1381 Pancreas Pancreatic cancer cells_DMSO 195 6 266 14 0 59 553 HNRNPUL1,AXL,CCDC97
SE_01_011200198 chr19:41264200-41267186 Sample_01_0112 Embryonic kidney HEK293_encode 198 1 63 3 0 34 361 HNRNPUL1,AXL,CCDC97,BCKDHA,TMEM91,ATP5SL,EXOSC5,B9D2
SE_02_081601257 chr19:41264214-41267491 Sample_02_0816 Ovary Clear cell ovarian cancer 1257 1 71 3 0 34 356 HNRNPUL1,AXL,CCDC97
SE_02_052400671 chr19:41264225-41267432 Sample_02_0524 Pancreas iPS derived pancreatic precursor cells_Lane2 671 1 70 3 0 34 354 HNRNPUL1,AXL,CCDC97
SE_02_138200113 chr19:41264230-41308638 Sample_02_1382 Pancreas Pancreatic cancer cells_Triptolide 113 12 1143 88 1 205 1784 HNRNPUL1,AXL,CCDC97,TGFB1
SE_02_070100549 chr19:41264239-41267279 Sample_02_0701 Bone David_TC32 549 1 64 3 0 34 352 HNRNPUL1,AXL,CCDC97
SE_02_138300226 chr19:41264240-41273284 Sample_02_1383 Pancreas Pancreatic cancer cells_THZ1 226 4 243 14 0 56 490 HNRNPUL1,AXL,CCDC97
SE_02_069200126 chr19:41264247-41267357 Sample_02_0692 Lung NCI-H526_no infection 126 1 68 3 0 34 350 HNRNPUL1,AXL,CCDC97
SE_02_139000383 chr19:41264248-41267332 Sample_02_1390 Peripheral blood SU-DHL-1_ALK+ 383 1 68 3 0 34 350 HNRNPUL1,AXL,CCDC97
SE_02_058400075 chr19:41264263-41274594 Sample_02_0584 Lung H1299 WT 75 3 273 14 0 58 545 HNRNPUL1,AXL,CCDC97
SE_02_099400749 chr19:41264289-41267227 Sample_02_0994 Blood MOLM13_SIK3TQ 749 1 62 3 0 26 343 HNRNPUL1,AXL,CCDC97
SE_02_142100168 chr19:41264314-41267245 Sample_02_1421 Brain NHA 168 1 61 3 0 25 336 HNRNPUL1,AXL,CCDC97
Genomic distribution of SEs associated with HNRNPUL1
Genome Browser

The strength of the tissue affected by the gene

Expression of HNRNPUL1

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)