SEdb 2.0
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  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000138796
Gene: HADH Gene type: protein_coding
Strand: + External links:
Genomic region: chr4:107989714-108035174 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_077600465 chr4:107970997-108009925 Sample_02_0776 Pancreas EndoC-BH1 465 5 967 107 3 40 257 HADH,CYP2U1,LOC101929595
SE_02_044401103 chr4:107973894-108030565 Sample_02_0444 Bone osteosarcoma tumor P10 1103 10 1442 167 4 65 492 HADH,CYP2U1,LOC101929595
SE_02_032500298 chr4:107976444-108010259 Sample_02_0325 Liver hepatocytes_d1 298 5 841 95 3 40 271 HADH,CYP2U1
SE_02_032700374 chr4:107976535-108010269 Sample_02_0327 Liver hepatocytes_d6 374 4 839 95 3 40 271 HADH,CYP2U1
SE_02_032600229 chr4:107976607-108010327 Sample_02_0326 Liver hepatocytes_d3 229 5 838 95 3 40 271 HADH,CYP2U1
SE_02_046500539 chr4:107976824-108030111 Sample_02_0465 Adipose subcutaneous adipocytes 539 21 1352 163 4 62 492 HADH,CYP2U1,LOC101929595
SE_01_007600551 chr4:107978162-108020037 Sample_01_0076 Gastrocnemius medialis gastrocnemius-medialis 551 3 1062 128 3 45 385 HADH,CYP2U1
SE_02_053301068 chr4:107978460-108009482 Sample_02_0533 Blood vessel Circle of Willis_54y 1068 13 771 91 2 34 228 HADH,CYP2U1,LOC101929595
SE_02_091000712 chr4:107978725-108018390 Sample_02_0910 Heart left ventricle_DCM_LV1275 712 14 1004 119 3 37 328 HADH,CYP2U1,LOC101929595
SE_01_009700383 chr4:107978794-108019092 Sample_01_0097 Gastrocnemius medialis gastrocnemius medialis_53y 383 10 1025 122 3 38 328 HADH,CYP2U1,LOC101929595
SE_02_089200694 chr4:107978939-108016724 Sample_02_0892 Heart left ventricle_LV1215 694 11 956 111 3 37 328 HADH,CYP2U1,LOC101929595
SE_01_008100939 chr4:107986572-108009634 Sample_01_0081 Right atrium auricular region right-atrium-auricular-region 939 3 599 72 2 31 231 HADH
SE_02_089800629 chr4:107986815-108033855 Sample_02_0898 Heart left ventricle_LV1356 629 18 1210 148 4 66 582 HADH
SE_02_090400517 chr4:107986829-108019026 Sample_02_0904 Heart left ventricle_DCM_LV1028 517 12 850 104 3 35 328 HADH
SE_00_005200628 chr4:107986863-108016663 Sample_00_0052 Heart left ventricle 3y 628 18 782 93 3 34 328 HADH
SE_02_090700719 chr4:107986961-108009962 Sample_02_0907 Heart left ventricle_DCM_LV1223 719 8 592 71 3 33 264 HADH
SE_02_088900785 chr4:107987056-108009338 Sample_02_0889 Heart left ventricle_LV1183 785 6 574 69 2 31 228 HADH
SE_02_089700582 chr4:107987089-108017538 Sample_02_0897 Heart left ventricle_LV1325 582 14 795 95 3 34 328 HADH
SE_02_091300646 chr4:107987112-108019118 Sample_02_0913 Heart left ventricle_DCM_LV1304 646 10 843 104 3 35 328 HADH
SE_02_090300711 chr4:107987132-108010610 Sample_02_0903 Heart left ventricle_DCM_LV1009 711 12 606 73 3 33 271 HADH
SE_02_089500748 chr4:107987237-108000880 Sample_02_0895 Heart left ventricle_LV1259 748 6 347 44 1 26 162 HADH
SE_02_091200820 chr4:107987273-108009831 Sample_02_0912 Heart left ventricle_DCM_LV1300 820 10 586 70 2 33 248 HADH
SE_02_091801026 chr4:107987295-108003827 Sample_02_0918 Heart left ventricle_DCM_LV1437 1026 7 420 52 1 27 162 HADH
SE_02_091700717 chr4:107987341-108009158 Sample_02_0917 Heart left ventricle_DCM_LV1433 717 9 566 68 2 31 228 HADH
SE_01_009800671 chr4:107987346-108018778 Sample_01_0098 Heart left ventricle_51y 671 9 832 102 3 35 328 HADH
SE_02_090100779 chr4:107987359-108031648 Sample_02_0901 Heart left ventricle_LV1471 779 22 1150 142 4 60 492 HADH
SE_02_091100601 chr4:107987363-108010696 Sample_02_0911 Heart left ventricle_DCM_LV1290 601 12 604 72 3 33 271 HADH
SE_02_089100755 chr4:107987388-108006861 Sample_02_0891 Heart left ventricle_LV1202 755 9 494 61 1 29 228 HADH
SE_02_089300346 chr4:107987406-108016929 Sample_02_0893 Heart left ventricle_LV1226 346 10 773 92 3 34 328 HADH
SE_02_090500630 chr4:107987439-108009926 Sample_02_0905 Heart left ventricle_DCM_LV1033 630 7 584 69 3 33 257 HADH
SE_02_089400567 chr4:107987472-108004081 Sample_02_0894 Heart left ventricle_LV1248 567 7 418 50 1 27 162 HADH
SE_02_090200980 chr4:107987484-108009206 Sample_02_0902 Heart left ventricle_LV1558 980 11 558 66 2 31 228 HADH
SE_02_088800961 chr4:107987486-108009559 Sample_02_0888 Heart left ventricle_LV1160 961 16 566 68 2 31 228 HADH
SE_02_090001124 chr4:107987512-108006787 Sample_02_0900 Heart left ventricle_LV1452 1124 10 485 60 1 29 228 HADH
SE_02_090900953 chr4:107987522-108008711 Sample_02_0909 Heart left ventricle_DCM_LV1264 953 9 545 65 1 30 228 HADH
SE_02_089601107 chr4:107987539-108016673 Sample_02_0896 Heart left ventricle_LV1294 1107 11 762 90 3 34 328 HADH
SE_02_090801356 chr4:107987555-108016962 Sample_02_0908 Heart left ventricle_DCM_LV1262 1356 10 765 91 3 34 328 HADH
SE_01_009400465 chr4:107987789-108018743 Sample_01_0094 Gastrocnemius medialis gastrocnemius medialis_54y 465 7 818 99 3 35 328 HADH
SE_02_088700652 chr4:107987802-108008791 Sample_02_0887 Heart left ventricle_LV1121 652 9 544 64 1 30 228 HADH
SE_02_004700584 chr4:107988229-108046551 Sample_02_0047 Pancreatic endoderm IIDP/donor790 584 14 1476 187 5 78 712 HADH
SE_02_003300573 chr4:107988341-108032134 Sample_02_0033 Pancreas pancreatic-islets-F 573 7 1133 140 4 63 492 HADH
SE_00_002100709 chr4:107988364-108006516 Sample_00_0021 Lung lung_3y 709 8 459 53 1 29 228 HADH
SE_02_024700113 chr4:107988504-108119414 Sample_02_0247 Haematopoietic and lymphoid tissue MOLT4_2 113 16 3265 336 9 293 1253 HADH,LEF1,LOC641518
SE_02_044501097 chr4:107988559-108001643 Sample_02_0445 Lung lung metastasis from primary osteosarcoma tumor M10 1097 1 327 40 1 27 162 HADH
SE_00_003200451 chr4:107988563-108008918 Sample_00_0032 Psoas muscle psoas-muscle_30y 451 8 525 62 2 30 228 HADH
SE_02_122300117 chr4:107989811-108037812 Sample_02_1223 Bone marrow KMS28BM 117 9 1233 149 4 74 649 HADH
SE_02_003100146 chr4:107999449-108122203 Sample_02_0031 Haematopoietic and lymphoid tissue blood Jurkat 146 14 3047 301 8 270 1091 HADH,LEF1,LOC641518
SE_02_005800196 chr4:108002657-108058011 Sample_02_0058 Haematopoietic and lymphoid tissue blood WT/Jurkat-11bp 196 10 1403 166 4 84 697 HADH,LEF1
SE_02_104701583 chr4:108007103-108085404 Sample_02_1047 Peripheral blood CD4+ cells_CTCL1181 1583 28 1995 222 4 180 968 HADH,LEF1
SE_02_021300354 chr4:108015197-108073332 Sample_02_0213 Burkitts lymphoma of the left maxilla Raji_JQ1 354 8 1468 171 2 98 621 HADH,LEF1
SE_02_006000485 chr4:108017617-108055075 Sample_02_0060 Haematopoietic and lymphoid tissue blood WT-11bp/Jurkat 485 7 935 111 2 71 531 HADH,LEF1
SE_02_005900303 chr4:108017691-108055724 Sample_02_0059 Haematopoietic and lymphoid tissue blood WT/Jurkat 303 9 945 112 2 71 531 HADH,LEF1
SE_00_004500360 chr4:108017733-108057711 Sample_00_0045 Thymus thymus 360 6 987 120 2 73 531 HADH,LEF1,CYP2U1
SE_02_130100329 chr4:108017932-108060724 Sample_02_1301 Blood PER-117 329 10 1057 127 2 77 531 HADH,LEF1
SE_02_022300150 chr4:108026189-108055286 Sample_02_0223 Haematopoietic and lymphoid tissue MOLT4_1 150 2 708 74 2 53 430 HADH,LEF1
SE_02_022500110 chr4:108027796-108119273 Sample_02_0225 Haematopoietic and lymphoid tissue PF-382 110 11 2234 206 5 240 785 HADH,LEF1,LOC641518
SE_02_121800447 chr4:108028278-108062202 Sample_02_1218 Bone marrow Daudi 447 20 836 94 1 59 367 HADH,LEF1
SE_01_005300244 chr4:108028331-108074531 Sample_01_0053 Haematopoietic and lymphoid tissue OCI-LY1 244 5 1148 124 1 82 457 HADH,LEF1
SE_01_005500535 chr4:108029841-108047039 Sample_01_0055 Haematopoietic and lymphoid tissue OCI-LY7 535 3 402 55 1 25 220 HADH
SE_02_014600505 chr4:108030105-108045112 Sample_02_0146 Bone marrow LP-1_SGC-CBP30 505 5 350 47 1 21 220 HADH
SE_02_139000038 chr4:108050574-108079436 Sample_02_1390 Peripheral blood SU-DHL-1_ALK+ 38 3 725 75 0 57 171 LEF1,HADH
Genomic distribution of SEs associated with HADH
Genome Browser

The strength of the tissue affected by the gene

Expression of HADH

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)