SEdb 2.0
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Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000253203
Gene: GUSBP3 Gene type: transcribed_unprocessed_pseudogene
Strand: - External links:
Genomic region: chr5:69639459-69679259 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_01_006400070 chr5:69798175-69915271 Sample_01_0064 Brain: derived from metastatic site: supra-orbital area SK-N-MC 70 33 23 1 0 0 1571 GUSBP3,SERF1A
SE_02_140600125 chr5:70572497-70604769 Sample_02_1406 Prostate LNCaP_EtOH_vehicle_4h 125 15 3 1 0 0 135 SMA5,GUSBP3,GUSBP9
SE_02_076400223 chr5:70572529-70602629 Sample_02_0764 Prostate LNCaP_DHT_DMSO_6h 223 9 3 1 0 0 135 SMA5,GUSBP3,GUSBP9
SE_02_140800101 chr5:70572852-70604658 Sample_02_1408 Prostate LNCaP_EtOH_vehicle_4h_MED19_OE 101 13 3 1 0 0 135 SMA5,GUSBP3,GUSBP9
SE_02_140700172 chr5:70572946-70603023 Sample_02_1407 Prostate LNCaP_R1881 4h 172 13 3 1 0 0 135 SMA5,GUSBP3,GUSBP9
SE_02_140900098 chr5:70572993-70605242 Sample_02_1409 Prostate LNCaP_R1881 4h_MED19_OE 98 15 3 1 0 0 135 SMA5,GUSBP3,GUSBP9
SE_02_141300729 chr5:70573961-70625952 Sample_02_1413 Muscle RH4_sgBRG1 729 13 3 1 0 0 135 SMA5,GUSBP3,GUSBP9
SE_02_068300284 chr5:70574824-70614847 Sample_02_0683 Lung DMS114 284 17 2 0 0 0 135 SMA5,GUSBP3,GUSBP9
SE_02_148600185 chr5:70575134-70603265 Sample_02_1486 Bone SK-N-MC 185 14 2 0 0 0 135 SMA5,GUSBP3,GUSBP9
SE_02_148200255 chr5:70575464-70605992 Sample_02_1482 Bone POE 255 18 2 0 0 0 135 SMA5,GUSBP3,GUSBP9
SE_02_106000413 chr5:70578154-70604691 Sample_02_1060 Bone TC71_SA2 KO 413 15 2 0 0 0 135 SMA5,GUSBP3,GUSBP9
SE_02_106100648 chr5:70578422-70605676 Sample_02_1061 Bone TC71_WT 648 17 2 0 0 0 135 SMA5,GUSBP3,GUSBP9
SE_02_148800593 chr5:70578589-70606333 Sample_02_1488 Bone TC-71 593 17 2 0 0 0 135 SMA5,GUSBP3,GUSBP9
SE_02_147600413 chr5:70578753-70594960 Sample_02_1476 Bone EW-1 413 8 2 0 0 0 135 SMA5,GUSBP3,GUSBP9
SE_02_129100071 chr5:70580390-70606032 Sample_02_1291 Lung NCI-H889_p8-15 71 9 2 0 0 0 118 SMA5,GUSBP3,GUSBP9
SE_02_148400305 chr5:70581335-70604184 Sample_02_1484 Bone Rh1 305 11 2 0 0 0 102 SMA5,GUSBP3,GUSBP9
SE_02_069500217 chr5:70587655-70603929 Sample_02_0695 Lung NCI-H889_no infection 217 16 0 0 0 0 0 SMA5,GUSBP3,GUSBP9
SE_02_068300080 chr5:70631056-70730729 Sample_02_0683 Lung DMS114 80 44 31 2 0 0 156 SMA5,GUSBP3
SE_02_141300436 chr5:70679664-70742794 Sample_02_1413 Muscle RH4_sgBRG1 436 13 11 1 0 0 156 GUSBP3
SE_02_148800292 chr5:70693952-70729290 Sample_02_1488 Bone TC-71 292 16 6 0 0 0 156 GUSBP3
SE_02_069300288 chr5:70694859-70730227 Sample_02_0693 Lung NCI-H69_no infection 288 16 6 0 0 0 156 GUSBP3
SE_02_106100344 chr5:70694943-70727231 Sample_02_1061 Bone TC71_WT 344 19 6 0 0 0 156 GUSBP3
SE_02_129100061 chr5:70699534-70724688 Sample_02_1291 Lung NCI-H889_p8-15 61 9 5 0 0 0 126 GUSBP3
SE_02_148600099 chr5:70699618-70730565 Sample_02_1486 Bone SK-N-MC 99 10 5 0 0 0 156 GUSBP3
SE_02_148200134 chr5:70699620-70730629 Sample_02_1482 Bone POE 134 11 5 0 0 0 156 GUSBP3
SE_02_140800116 chr5:70699655-70732889 Sample_02_1408 Prostate LNCaP_EtOH_vehicle_4h_MED19_OE 116 16 5 0 0 0 156 GUSBP3
SE_02_106000272 chr5:70699936-70727221 Sample_02_1060 Bone TC71_SA2 KO 272 12 5 0 0 0 156 GUSBP3
SE_02_140900115 chr5:70700621-70732903 Sample_02_1409 Prostate LNCaP_R1881 4h_MED19_OE 115 16 5 0 0 0 156 GUSBP3
SE_02_076400247 chr5:70700832-70733257 Sample_02_0764 Prostate LNCaP_DHT_DMSO_6h 247 17 5 0 0 0 156 GUSBP3
SE_02_140700178 chr5:70700855-70733243 Sample_02_1407 Prostate LNCaP_R1881 4h 178 10 5 0 0 0 156 GUSBP3
SE_02_148400150 chr5:70700876-70725045 Sample_02_1484 Bone Rh1 150 19 5 0 0 0 126 GUSBP3
SE_02_140600154 chr5:70700909-70732418 Sample_02_1406 Prostate LNCaP_EtOH_vehicle_4h 154 13 5 0 0 0 156 GUSBP3
SE_02_069500139 chr5:70701729-70721454 Sample_02_0695 Lung NCI-H889_no infection 139 23 5 0 0 0 126 GUSBP3
SE_02_070200317 chr5:70706548-70726976 Sample_02_0702 Bone David_TC71 317 12 5 0 0 0 156 GUSBP3
SE_02_148500661 chr5:70709504-70730630 Sample_02_1485 Bone SK-ES-1 661 7 5 0 0 0 156 GUSBP3
SE_02_147600376 chr5:70710520-70729775 Sample_02_1476 Bone EW-1 376 7 5 0 0 0 156 GUSBP3
SE_02_128001092 chr5:70710753-70727616 Sample_02_1280 Bone Mesenchymal stem cells_SPC_mutation_ EF1 1092 6 5 0 0 0 156 GUSBP3
SE_02_066400263 chr5:70713745-70733260 Sample_02_0664 Prostate LNCaP_DMSO 263 7 5 0 0 0 156 GUSBP3
SE_02_077502264 chr5:70717659-70750001 Sample_02_0775 Pancreas EndoC-BH1_SE 2264 8 7 0 0 0 183 GUSBP3
SE_02_098901299 chr5_GL339449v2_alt:269033-327103 Sample_02_0989 Kidney kidney cortex_WT 1299 20 0 0 0 0 0 GUSBP3,LOC647859
SE_02_075400091 chr5_GL339449v2_alt:271268-314786 Sample_02_0754 Embryo ES-derived progenitors Pancreatic Progenitors 1 WT 91 10 0 0 0 0 0 GUSBP3
SE_02_075700475 chr5_GL339449v2_alt:271451-302636 Sample_02_0757 Embryo ES-derived progenitors_FOXA2 -/- 475 10 0 0 0 0 0 GUSBP3
SE_02_052400486 chr5_GL339449v2_alt:271589-314722 Sample_02_0524 Pancreas iPS derived pancreatic precursor cells_Lane2 486 15 0 0 0 0 0 GUSBP3
SE_02_081900417 chr5_GL339449v2_alt:271908-326983 Sample_02_0819 Ovary Mucinous ovarian cancer 417 15 0 0 0 0 0 GUSBP3,LOC647859
SE_01_010100998 chr5_GL339449v2_alt:272082-304127 Sample_01_0101 Pancreas pancreas_54y 998 9 0 0 0 0 0 GUSBP3
SE_02_071100373 chr5_GL339449v2_alt:272324-314089 Sample_02_0711 Pancreas hN35_organoid 373 10 0 0 0 0 0 GUSBP3
SE_02_074900661 chr5_GL339449v2_alt:273818-286440 Sample_02_0749 Mammary gland HCC1599_GSI 661 2 0 0 0 0 0 GUSBP3
SE_02_071000371 chr5_GL339449v2_alt:273880-304553 Sample_02_0710 Pancreas hN34_organoid 371 10 0 0 0 0 0 GUSBP3
SE_02_074800781 chr5_GL339449v2_alt:274025-286500 Sample_02_0748 Mammary gland HCC1599_WO 781 4 0 0 0 0 0 GUSBP3
SE_02_137100664 chr5_GL339449v2_alt:274324-311056 Sample_02_1371 Pancreas Patu899S-untreated 664 18 0 0 0 0 0 GUSBP3
SE_02_075300460 chr5_GL339449v2_alt:274712-313968 Sample_02_0753 Embryo ES-derived progenitors_FG type 460 13 0 0 0 0 0 GUSBP3
SE_02_123000345 chr5_GL339449v2_alt:274730-311624 Sample_02_1230 Lung PC9 345 14 0 0 0 0 0 GUSBP3
SE_02_151200465 chr5_GL339449v2_alt:274748-304475 Sample_02_1512 Lung Purified AT2 cells 465 15 0 0 0 0 0 GUSBP3
SE_02_153300378 chr5_GL339449v2_alt:274748-311600 Sample_02_1533 Lung purified primary alveolar epithelial type 2 cells 378 14 0 0 0 0 0 GUSBP3
SE_02_045300593 chr5_GL339449v2_alt:274751-304690 Sample_02_0453 Neuroblastoma SJNB3 593 13 0 0 0 0 0 GUSBP3
SE_02_151300653 chr5_GL339449v2_alt:274919-305121 Sample_02_1513 Lung Transitional AT2->1 cells 653 10 0 0 0 0 0 GUSBP3
SE_02_061000970 chr5_GL339449v2_alt:274939-304588 Sample_02_0610 Liposarcoma MLS 1765-92 970 9 0 0 0 0 0 GUSBP3
SE_02_147000582 chr5_GL339449v2_alt:275001-310289 Sample_02_1470 Umbilical Vein H441 582 9 0 0 0 0 0 GUSBP3
SE_02_103501782 chr5_GL339449v2_alt:275121-303558 Sample_02_1035 Mammary gland HCC70_Vehicle 1782 11 0 0 0 0 0 GUSBP3
SE_02_061500938 chr5_GL339449v2_alt:275134-304621 Sample_02_0615 Liposarcoma liposarcoma cells_MLS402 938 13 0 0 0 0 0 GUSBP3
SE_02_153901034 chr5_GL339449v2_alt:275210-304667 Sample_02_1539 Nasopharyngeal C666-1 1034 14 0 0 0 0 0 GUSBP3
SE_02_103602455 chr5_GL339449v2_alt:275326-284517 Sample_02_1036 Mammary gland HCC70_XY018 2455 7 0 0 0 0 0 GUSBP3
SE_02_123200281 chr5_GL339449v2_alt:275467-304145 Sample_02_1232 Lung PC9_siMED13L-2 281 12 0 0 0 0 0 GUSBP3
SE_02_123100251 chr5_GL339449v2_alt:275469-310909 Sample_02_1231 Lung PC9_siMED13L-1 251 13 0 0 0 0 0 GUSBP3
SE_02_123300412 chr5_GL339449v2_alt:275560-304055 Sample_02_1233 Lung PC9_miR-4497 mimic 412 10 0 0 0 0 0 GUSBP3
SE_02_151400868 chr5_GL339449v2_alt:275897-304203 Sample_02_1514 Lung Differentiated AT1-like cells 868 10 0 0 0 0 0 GUSBP3
SE_02_141300357 chr5_GL339449v2_alt:806536-859558 Sample_02_1413 Muscle RH4_sgBRG1 357 12 0 0 0 0 0 GUSBP3
SE_02_068300195 chr5_GL339449v2_alt:817740-857963 Sample_02_0683 Lung DMS114 195 22 0 0 0 0 0 GUSBP3
SE_02_106100216 chr5_GL339449v2_alt:821914-856460 Sample_02_1061 Bone TC71_WT 216 17 0 0 0 0 0 GUSBP3
SE_02_148800230 chr5_GL339449v2_alt:822005-854515 Sample_02_1488 Bone TC-71 230 14 0 0 0 0 0 GUSBP3
SE_02_069300194 chr5_GL339449v2_alt:822345-857489 Sample_02_0693 Lung NCI-H69_no infection 194 21 0 0 0 0 0 GUSBP3
SE_02_129100068 chr5_GL339449v2_alt:826440-851747 Sample_02_1291 Lung NCI-H889_p8-15 68 10 0 0 0 0 0 GUSBP3
SE_02_148200118 chr5_GL339449v2_alt:826784-857852 Sample_02_1482 Bone POE 118 6 0 0 0 0 0 GUSBP3
SE_02_148600125 chr5_GL339449v2_alt:826925-857226 Sample_02_1486 Bone SK-N-MC 125 12 0 0 0 0 0 GUSBP3
SE_02_140800123 chr5_GL339449v2_alt:827529-860141 Sample_02_1408 Prostate LNCaP_EtOH_vehicle_4h_MED19_OE 123 13 0 0 0 0 0 GUSBP3
SE_02_069500154 chr5_GL339449v2_alt:827624-851865 Sample_02_0695 Lung NCI-H889_no infection 154 19 0 0 0 0 0 GUSBP3
SE_02_106000174 chr5_GL339449v2_alt:827708-854515 Sample_02_1060 Bone TC71_SA2 KO 174 9 0 0 0 0 0 GUSBP3
SE_02_148400081 chr5_GL339449v2_alt:827793-852340 Sample_02_1484 Bone Rh1 81 12 0 0 0 0 0 GUSBP3
SE_02_148500388 chr5_GL339449v2_alt:827880-857576 Sample_02_1485 Bone SK-ES-1 388 5 0 0 0 0 0 GUSBP3
SE_02_076400260 chr5_GL339449v2_alt:828211-860499 Sample_02_0764 Prostate LNCaP_DHT_DMSO_6h 260 10 0 0 0 0 0 GUSBP3
SE_02_140900130 chr5_GL339449v2_alt:828344-860388 Sample_02_1409 Prostate LNCaP_R1881 4h_MED19_OE 130 16 0 0 0 0 0 GUSBP3
SE_02_070200209 chr5_GL339449v2_alt:828575-852374 Sample_02_0702 Bone David_TC71 209 20 0 0 0 0 0 GUSBP3
SE_02_140600167 chr5_GL339449v2_alt:830688-860173 Sample_02_1406 Prostate LNCaP_EtOH_vehicle_4h 167 13 0 0 0 0 0 GUSBP3
SE_02_140700193 chr5_GL339449v2_alt:831713-860067 Sample_02_1407 Prostate LNCaP_R1881 4h 193 8 0 0 0 0 0 GUSBP3
SE_02_128000799 chr5_GL339449v2_alt:837578-856999 Sample_02_1280 Bone Mesenchymal stem cells_SPC_mutation_ EF1 799 8 0 0 0 0 0 GUSBP3
SE_02_148300851 chr5_GL339449v2_alt:837802-853869 Sample_02_1483 Bone RD-ES 851 11 0 0 0 0 0 GUSBP3
SE_02_147600567 chr5_GL339449v2_alt:838056-854605 Sample_02_1476 Bone EW-1 567 5 0 0 0 0 0 GUSBP3
SE_02_068701326 chr5_GL339449v2_alt:841386-866014 Sample_02_0687 Lung NCI-H146_no infection 1326 12 0 0 0 0 0 GUSBP3
SE_02_066400311 chr5_GL339449v2_alt:842187-860652 Sample_02_0664 Prostate LNCaP_DMSO 311 6 0 0 0 0 0 GUSBP3
SE_02_077502071 chr5_GL339449v2_alt:845071-877287 Sample_02_0775 Pancreas EndoC-BH1_SE 2071 9 0 0 0 0 0 GUSBP3
Genomic distribution of SEs associated with GUSBP3
Genome Browser

The strength of the tissue affected by the gene

Expression of GUSBP3

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)