Gene overview
| Strategies/Algorithm: | closest | Ensembl ID: | ENSG00000127928 |
| Gene: | GNGT1 | Gene type: | protein_coding |
| Strand: | + | External links: |
|
| Genomic region: | chr7:93591573-93911265 | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_02_108300913 | chr7:93888632-93911564 |
Sample_02_1083 | Macula | macula | 913 | 11 | 662 | 46 | 1 | 43 | 493 | GNGT1,TFPI2,GNG11 |
| SE_02_049201016 | chr7:93888772-93918298 |
Sample_02_0492 | Pharyng | Detroit 562_LPS | 1016 | 12 | 877 | 63 | 1 | 54 | 493 | GNGT1,TFPI2,GNG11 |
| SE_00_003100773 | chr7:93888951-93924499 |
Sample_00_0031 | Placenta | placenta | 773 | 4 | 1029 | 74 | 3 | 73 | 645 | GNGT1,GNG11,TFPI2,BET1 |
| SE_02_011400483 | chr7:93889347-93924954 |
Sample_02_0114 | Mammary gland | CAL51 | 483 | 7 | 1034 | 75 | 3 | 75 | 603 | GNGT1,GNG11,TFPI2 |
| SE_02_008600391 | chr7:93891860-93924337 |
Sample_02_0086 | Pancreas | CAPAN1 | 391 | 3 | 939 | 67 | 3 | 65 | 361 | GNGT1,GNG11,TFPI2 |
| SE_02_080900079 | chr7:93892515-93928318 |
Sample_02_0809 | Mammary gland | T47D Serum | 79 | 4 | 1071 | 76 | 4 | 80 | 415 | GNGT1,GNG11,TFPI2 |
| SE_02_081000320 | chr7:93892875-93927092 |
Sample_02_0810 | Mammary gland | T47D noSerum | 320 | 19 | 1025 | 73 | 3 | 75 | 415 | GNGT1,GNG11,TFPI2 |
| SE_02_053200123 | chr7:93893253-93927669 |
Sample_02_0532 | Mammary gland | T47D | 123 | 11 | 1029 | 74 | 3 | 75 | 415 | GNGT1,GNG11,TFPI2 |
| SE_02_039400283 | chr7:93893414-93925758 |
Sample_02_0394 | Mammary gland | T-47D_2 | 283 | 6 | 956 | 72 | 3 | 68 | 361 | GNGT1,GNG11,TFPI2 |
| SE_02_026800808 | chr7:93897061-93924037 |
Sample_02_0268 | Kidney | A-498 | 808 | 6 | 789 | 62 | 3 | 52 | 361 | GNGT1,GNG11,TFPI2 |
| SE_02_001000837 | chr7:93897306-93924110 |
Sample_02_0010 | Kidney | A-498_emptyvector | 837 | 4 | 785 | 62 | 3 | 52 | 361 | GNGT1,GNG11,TFPI2 |
| SE_02_152300101 | chr7:93897527-93924658 |
Sample_02_1523 | Lung | A549 DMSO | 101 | 4 | 783 | 62 | 3 | 56 | 361 | GNGT1,GNG11,TFPI2 |
| SE_02_029400831 | chr7:93902721-93924804 |
Sample_02_0294 | Pancreatic | L3-6_DMSO | 831 | 4 | 649 | 49 | 3 | 53 | 361 | GNGT1,GNG11,TFPI2 |
Genomic distribution of SEs associated with GNGT1