SEdb 2.0
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Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000109920
Gene: FNBP4 Gene type: protein_coding
Strand: - External links:
Genomic region: chr11:47716494-47767443 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_104700423 chr11:47701688-47791723 Sample_02_1047 Peripheral blood CD4+ cells_CTCL1181 423 32 2295 217 4 216 1852 AGBL2,FNBP4,NUP160
SE_02_104900213 chr11:47717817-47893532 Sample_02_1049 Peripheral blood CD4+ cell_ROMI 213 87 4483 437 11 394 2569 FNBP4,NUP160,AGBL2
SE_02_138200331 chr11:47727275-47769974 Sample_02_1382 Pancreas Pancreatic cancer cells_Triptolide 331 12 1151 111 3 100 695 FNBP4,AGBL2
SE_02_103600402 chr11:47728311-47867439 Sample_02_1036 Mammary gland HCC70_XY018 402 54 3614 352 10 330 2297 FNBP4,NUP160,AGBL2
SE_02_104301413 chr11:47732907-47777673 Sample_02_1043 Peripheral blood Peripheral blood cells_CTCL1200 1413 11 1264 128 3 57 557 FNBP4,AGBL2
SE_02_111200430 chr11:47737540-47815654 Sample_02_1112 T lymphocyte THP-6 T-ALL 430 16 2098 198 6 184 1397 FNBP4,NUP160,AGBL2
SE_02_088900633 chr11:47759008-47801367 Sample_02_0889 Heart left ventricle_LV1183 633 12 1107 112 4 115 735 FNBP4,NUP160,AGBL2
SE_02_089200606 chr11:47759133-47801350 Sample_02_0892 Heart left ventricle_LV1215 606 19 1100 112 4 115 735 FNBP4,NUP160,AGBL2
SE_02_089800927 chr11:47759184-47800801 Sample_02_0898 Heart left ventricle_LV1356 927 10 1082 112 4 115 735 FNBP4,NUP160,AGBL2
SE_02_089600833 chr11:47759594-47801390 Sample_02_0896 Heart left ventricle_LV1294 833 16 1083 110 4 115 735 FNBP4,NUP160,AGBL2
SE_02_090800982 chr11:47759963-47801615 Sample_02_0908 Heart left ventricle_DCM_LV1262 982 17 1078 109 3 115 735 FNBP4,NUP160,AGBL2
SE_02_074700772 chr11:47761229-47793399 Sample_02_0747 Embryo ES derived ventricular cardiomyocyte_day80 772 13 815 86 2 91 637 FNBP4,NUP160,AGBL2
SE_02_074600592 chr11:47761287-47772023 Sample_02_0746 Embryo ES derived primitive cardiomyocite_day15 592 3 299 35 1 20 222 FNBP4,AGBL2
SE_01_009800728 chr11:47762803-47801293 Sample_01_0098 Heart left ventricle_51y 728 13 997 102 2 115 735 FNBP4,NUP160,AGBL2
SE_02_091100758 chr11:47763064-47801433 Sample_02_0911 Heart left ventricle_DCM_LV1290 758 12 992 102 2 115 735 FNBP4,NUP160,AGBL2
SE_02_076000568 chr11:47763155-47770432 Sample_02_0760 Ovary BIN-67_SMARCA4 568 2 201 29 0 20 222 FNBP4,AGBL2
SE_02_127300905 chr11:47764420-47770253 Sample_02_1273 Cervix HeLa 905 2 177 23 0 20 222 FNBP4,AGBL2
SE_02_143100900 chr11:47764421-47769467 Sample_02_1431 Blood T cell 900 1 149 21 0 20 222 FNBP4,AGBL2
SE_02_064502133 chr11:47764731-47767419 Sample_02_0645 Tracheobronchial epithelial HTBE_H1N1_18h 2133 2 80 11 0 17 179 FNBP4,AGBL2
SE_02_090400573 chr11:47764822-47801529 Sample_02_0904 Heart left ventricle_DCM_LV1028 573 15 966 97 2 115 735 FNBP4,NUP160,AGBL2
SE_01_007800901 chr11:47764857-47793762 Sample_01_0078 Heart left ventricle heart-left-ventricle 901 4 745 78 1 91 637 FNBP4,NUP160
SE_02_055500576 chr11:47764869-47769179 Sample_02_0555 Other HAP1_WT 576 1 129 15 0 20 222 FNBP4,AGBL2
SE_02_089700486 chr11:47764907-47801384 Sample_02_0897 Heart left ventricle_LV1325 486 15 960 95 2 115 735 FNBP4,NUP160,AGBL2
SE_02_061500940 chr11:47765060-47769467 Sample_02_0615 Liposarcoma liposarcoma cells_MLS402 940 2 132 17 0 20 222 FNBP4,AGBL2
SE_02_088700763 chr11:47765070-47793131 Sample_02_0887 Heart left ventricle_LV1121 763 6 719 77 1 91 636 FNBP4,NUP160,AGBL2
SE_02_062300503 chr11:47765076-47769536 Sample_02_0623 Mammary gland TAMR_E2 503 1 131 17 0 20 221 FNBP4,AGBL2
SE_02_091001001 chr11:47765149-47801345 Sample_02_0910 Heart left ventricle_DCM_LV1275 1001 16 950 95 2 115 732 FNBP4,NUP160,AGBL2
SE_02_092200801 chr11:47765154-47801351 Sample_02_0922 Heart fetal heart_PCW10_12434 801 9 950 95 2 115 732 FNBP4,NUP160,AGBL2
SE_01_010701197 chr11:47765186-47769193 Sample_01_0107 Esophagus esophagus squamous epithelium 1197 1 120 15 0 20 219 FNBP4,AGBL2
SE_02_148300865 chr11:47765188-47769867 Sample_02_1483 Bone RD-ES 865 2 143 18 0 20 219 FNBP4,AGBL2
SE_02_068800256 chr11:47765201-47768976 Sample_02_0688 Lung NCI-H211_no infection 256 1 114 15 0 20 219 FNBP4,AGBL2
SE_02_088400952 chr11:47765203-47770105 Sample_02_0884 Colon LoVo 952 1 151 19 0 20 219 FNBP4,AGBL2
SE_01_003600261 chr11:47765236-47769630 Sample_01_0036 Cervix HeLa-S3 261 1 135 17 0 20 215 FNBP4
SE_02_091300882 chr11:47765238-47801558 Sample_02_0913 Heart left ventricle_DCM_LV1304 882 16 956 96 2 115 728 FNBP4,NUP160,AGBL2
SE_02_062500448 chr11:47765240-47769412 Sample_02_0625 Mammary gland WS8_4OHT 448 1 125 16 0 20 215 FNBP4,AGBL2
SE_02_091900833 chr11:47765266-47792911 Sample_02_0919 Heart left ventricle_DCM_LV1532 833 10 711 76 1 89 605 FNBP4,NUP160,AGBL2
SE_02_092400600 chr11:47765285-47801241 Sample_02_0924 Heart fetal heart_PCW10_12569 600 11 950 95 2 114 724 FNBP4,NUP160,AGBL2
SE_01_008100949 chr11:47765307-47801779 Sample_01_0081 Right atrium auricular region right-atrium-auricular-region 949 6 962 96 2 112 734 FNBP4,NUP160
SE_02_099100608 chr11:47765323-47769703 Sample_02_0991 Breast cancer cell line lung metastatic variant MDA-MB-231 LM2 608 2 137 17 0 17 207 FNBP4,AGBL2
SE_02_092500659 chr11:47765341-47801284 Sample_02_0925 Heart fetal heart_PCW17_12570 659 14 950 95 2 112 719 FNBP4,NUP160,AGBL2
SE_00_003900930 chr11:47765377-47769021 Sample_00_0039 Spleen spleen_3y 930 1 112 15 0 17 202 FNBP4,AGBL2,TCH2
SE_02_119900847 chr11:47765402-47769310 Sample_02_1199 Brain GBM35 847 1 116 15 0 17 202 FNBP4
SE_02_064601281 chr11:47765418-47767401 Sample_02_0646 Tracheobronchial epithelial HTBE_H1N1_24h 1281 1 57 9 0 14 157 FNBP4
SE_02_085701322 chr11:47765420-47769401 Sample_02_0857 Glioblastoma Glioblastoma neurosphere cell_HF-3035 1322 1 115 16 0 17 202 FNBP4
SE_02_099200678 chr11:47765420-47769562 Sample_02_0992 Mammary gland MDA-MB-231_Par 678 2 122 17 0 17 202 FNBP4
SE_02_117600619 chr11:47765421-47769123 Sample_02_1176 Brain GBM04 619 1 110 15 0 17 202 FNBP4
SE_02_090300817 chr11:47765425-47801363 Sample_02_0903 Heart left ventricle_DCM_LV1009 817 8 940 95 2 112 715 FNBP4,NUP160
SE_02_102500808 chr11:47765436-47768692 Sample_02_1025 Esophagus KYSE150 808 1 94 14 0 17 200 FNBP4
SE_02_081600665 chr11:47765511-47785239 Sample_02_0816 Ovary Clear cell ovarian cancer 665 3 522 61 0 51 432 FNBP4,NUP160
SE_02_090500865 chr11:47765541-47801371 Sample_02_0905 Heart left ventricle_DCM_LV1033 865 10 934 95 2 112 702 FNBP4,NUP160
SE_02_092300683 chr11:47765630-47801212 Sample_02_0923 Heart fetal heart_PCW10_12522 683 9 933 93 2 112 702 FNBP4,NUP160
SE_02_143300520 chr11:47765643-47770878 Sample_02_1433 Bone A673 STAG2 null 520 3 163 22 0 17 189 FNBP4
SE_02_099000756 chr11:47765659-47769444 Sample_02_0990 Breast cancer brain metastatic variant MDA-MB-231 BrM2 756 1 110 14 0 17 189 FNBP4
SE_02_091200844 chr11:47765685-47801420 Sample_02_0912 Heart left ventricle_DCM_LV1300 844 10 933 93 2 112 702 FNBP4,NUP160
SE_02_089300739 chr11:47765775-47801458 Sample_02_0893 Heart left ventricle_LV1226 739 10 932 93 2 112 702 FNBP4,NUP160,AGBL2
SE_02_089000824 chr11:47765859-47801062 Sample_02_0890 Heart left ventricle_LV1200 824 9 923 93 2 112 702 FNBP4,NUP160,AGBL2
SE_02_090701035 chr11:47767532-47801268 Sample_02_0907 Heart left ventricle_DCM_LV1223 1035 8 880 85 2 96 529 NUP160,FNBP4
SE_02_074500730 chr11:47767580-47780373 Sample_02_0745 Embryo ES derived cardiac progenitor cells_day7 730 3 351 41 0 19 124 NUP160,FNBP4
SE_02_089101246 chr11:47767580-47801247 Sample_02_0891 Heart left ventricle_LV1202 1246 10 880 85 2 96 519 NUP160,FNBP4,AGBL2
SE_02_089400594 chr11:47767582-47800862 Sample_02_0894 Heart left ventricle_LV1248 594 9 866 85 2 96 519 NUP160,FNBP4,AGBL2
Genomic distribution of SEs associated with FNBP4
Genome Browser

The strength of the tissue affected by the gene

Expression of FNBP4

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)