SEdb 2.0
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Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000146067
Gene: FAM193B Gene type: protein_coding
Strand: - External links:
Genomic region: chr5:177519789-177554563 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_010500454 chr5:177514700-177559621 Sample_02_0105 Skin neonatal_keratinocytes 454 5 1033 75 1 267 2266 DDX41,FAM193B,DOK3,DBN1,TMED9,PDLIM7,B4GALT7
SE_02_036800284 chr5:177515482-177558008 Sample_02_0368 Skeletal muscle NS134 284 12 970 70 1 263 2131 DDX41,FAM193B,DOK3,DBN1,TMED9,PDLIM7,B4GALT7
SE_02_050600706 chr5:177515907-177576285 Sample_02_0506 Esophagus TE5_1 706 9 1447 120 1 258 2064 DDX41,FAM193B,DOK3,TMED9,PDLIM7,DBN1,B4GALT7
SE_02_006300900 chr5:177516015-177559615 Sample_02_0063 Skin Keratinocytes 900 6 1002 75 1 257 2051 DDX41,FAM193B,DOK3,DBN1,TMED9,PDLIM7,B4GALT7
SE_01_009400612 chr5:177516248-177557624 Sample_01_0094 Gastrocnemius medialis gastrocnemius medialis_54y 612 11 941 69 1 255 2019 DDX41,FAM193B,DOK3,TMED9,PDLIM7,DBN1,B4GALT7
SE_02_141600269 chr5:177518489-177554989 Sample_02_1416 Brain SF9402 269 9 836 59 0 242 1834 FAM193B,DOK3,TMED9,DDX41,PDLIM7,DBN1,B4GALT7
SE_02_048001199 chr5:177528819-177550763 Sample_02_0480 Gingival epithelial HGEP 1199 10 506 37 0 126 698 FAM193B,DOK3,TMED9,B4GALT7,DDX41,PDLIM7,PRR7,GRK6,LMAN2
SE_02_112100550 chr5:177528981-177557884 Sample_02_1121 Neonatal foreskin keratinocytes_Mi2KD 550 14 643 49 1 187 1203 FAM193B,DOK3,TMED9,B4GALT7,DDX41,PDLIM7
SE_02_093800672 chr5:177529095-177547153 Sample_02_0938 Retinal Pigmented Epithelial RPE190_TnT 672 6 418 29 0 120 698 FAM193B,DOK3,TMED9,PDLIM7,DDX41
SE_02_093600529 chr5:177529610-177548826 Sample_02_0936 Retinal Pigmented Epithelial RPE188_TnT 529 4 445 33 0 122 698 FAM193B,DOK3,TMED9,PDLIM7,DDX41
SE_02_093500617 chr5:177532718-177560415 Sample_02_0935 Retinal Pigmented Epithelial RPE188_Con 617 9 652 55 1 133 889 FAM193B,DOK3,TMED9,B4GALT7,DDX41,PDLIM7
SE_02_011001140 chr5:177535625-177555383 Sample_02_0110 Ovaries IOE11 1140 3 452 36 0 133 867 FAM193B,DOK3,TMED9,PDLIM7,B4GALT7,DDX41
SE_02_064300802 chr5:177536393-177547980 Sample_02_0643 Mammary gland MDA-MB-436 802 6 282 26 0 65 330 FAM193B,DOK3,TMED9,PDLIM7,DDX41
SE_02_008800596 chr5:177536688-177547888 Sample_02_0088 Umbilical cord umbilical-cord-derived-mesenchymal-stem-cells_SGA_cycle_0 596 4 270 24 0 51 247 FAM193B,DOK3,TMED9,PDLIM7,DDX41
SE_02_084900644 chr5:177536747-177547016 Sample_02_0849 iPSCs iPSC_CBP-30 644 4 243 21 0 48 233 FAM193B,DOK3,TMED9,PDLIM7,DDX41
SE_02_154900630 chr5:177536805-177549159 Sample_02_1549 Gastrointestinal Stromal GIST-430B 630 6 292 27 0 48 220 FAM193B,DOK3,TMED9,PDLIM7,DDX41
SE_02_021101034 chr5:177537403-177555108 Sample_02_0211 Lung MRC-5_NFD_1DPT 1034 4 401 33 0 107 709 FAM193B,DOK3,TMED9,PDLIM7,B4GALT7,DDX41
SE_02_004001224 chr5:177537432-177559575 Sample_02_0040 Embryo PFG 1224 5 499 45 1 107 709 FAM193B,DOK3,TMED9,PDLIM7,B4GALT7,DDX41
SE_02_141300689 chr5:177542524-177550690 Sample_02_1413 Muscle RH4_sgBRG1 689 1 198 21 0 13 0 FAM193B,DOK3,TMED9,B4GALT7,DDX41,PDLIM7
SE_02_075300373 chr5:177542901-177570421 Sample_02_0753 Embryo ES-derived progenitors_FG type 373 4 670 61 1 74 505 FAM193B,DOK3,TMED9,B4GALT7,DDX41,PDLIM7
SE_02_103602164 chr5:177545040-177560652 Sample_02_1036 Mammary gland HCC70_XY018 2164 3 368 38 1 71 505 FAM193B,DOK3,TMED9,B4GALT7,DDX41,PDLIM7
SE_02_075700905 chr5:177545083-177570235 Sample_02_0757 Embryo ES-derived progenitors_FOXA2 -/- 905 5 615 58 1 71 505 FAM193B,DOK3,TMED9,B4GALT7,DDX41,PDLIM7
SE_02_077501386 chr5:177547262-177589484 Sample_02_0775 Pancreas EndoC-BH1_SE 1386 15 1057 132 1 66 505 FAM193B,DOK3,TMED9,B4GALT7,DDX41,PDLIM7
Genomic distribution of SEs associated with FAM193B
Genome Browser

The strength of the tissue affected by the gene

Expression of FAM193B

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)