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Super-enhancer overview

SE ID: SE_02_008800596
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Stem cell
Tissue type: Umbilical cord
Biosample name: umbilical-cord-derived-mesenchymal-stem-cells_SGA_cycle_0
Genomic region: chr5:177536688-177547888
Size: 11200
Super-enhancer rank 596
Number of SE elements: 4
ChIP density(Case|Control): 15617.28|1226.4
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: FAM193B;
ROSE Overlap FAM193B;
ROSE Proximal DOK3; TMED9; FAM193B; PDLIM7; DDX41;
ROSE Closest FAM193B;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_008800596 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers