SEdb 2.0
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  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000160213
Gene: CSTB Gene type: protein_coding
Strand: - External links:
Genomic region: chr21:43772511-43776330 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_151000080 chr21:43710378-43786691 Sample_02_1510 Lung H3122_LR_Pano 80 35 2642 262 5 68 3408 PDXK,CSTB,RRP1,AATBC
SE_02_051700295 chr21:43721055-43777024 Sample_02_0517 Esophagus TE5 295 23 2014 188 4 54 3221 PDXK,CSTB,RRP1,AATBC
SE_02_050600294 chr21:43721055-43781499 Sample_02_0506 Esophagus TE5_1 294 25 2172 208 5 54 3221 PDXK,CSTB,RRP1,AATBC
SE_02_138500306 chr21:43721503-43778869 Sample_02_1385 Other iPSCs 306 24 2089 198 4 54 3221 PDXK,CSTB,RRP1,AATBC
SE_02_143200321 chr21:43724108-43779002 Sample_02_1432 Bone A673 STAG2 WT 321 34 2013 191 4 51 3221 PDXK,CSTB,RRP1,AATBC
SE_02_138100519 chr21:43724111-43773062 Sample_02_1381 Pancreas Pancreatic cancer cells_DMSO 519 34 1778 169 4 46 2829 PDXK,RRP1,CSTB,AATBC
SE_02_143300322 chr21:43724972-43778916 Sample_02_1433 Bone A673 STAG2 null 322 31 1980 185 4 51 3221 PDXK,CSTB,RRP1,AATBC
SE_02_064501263 chr21:43727105-43769057 Sample_02_0645 Tracheobronchial epithelial HTBE_H1N1_18h 1263 7 1529 139 4 46 2829 PDXK,RRP1,CSTB,AATBC
SE_02_124400358 chr21:43727644-43768180 Sample_02_1244 Brain KCNR_ATRA 358 8 1464 131 4 46 2829 PDXK,RRP1,CSTB,AATBC
SE_02_138400256 chr21:43727954-43778987 Sample_02_1384 Other induced pluripotent stem cell derived Neuronal progenitor cell 256 15 1886 173 4 51 3221 PDXK,CSTB,RRP1,AATBC
SE_02_138300577 chr21:43727982-43773072 Sample_02_1383 Pancreas Pancreatic cancer cells_THZ1 577 27 1650 151 4 46 2829 PDXK,RRP1,CSTB,AATBC
SE_02_116000246 chr21:43728125-43768740 Sample_02_1160 Embryo H1_shLuc 246 7 1477 135 4 46 2829 PDXK,RRP1,CSTB,AATBC
SE_02_015800119 chr21:43749344-43779362 Sample_02_0158 Brain U87_EGFRvIII_erlotinib 119 7 1133 125 1 28 2068 CSTB,PDXK,LOC284837,RRP1
SE_02_066000378 chr21:43749548-43783800 Sample_02_0660 Mammary gland MCF10DCIS 378 11 1254 139 2 28 2068 PDXK,CSTB,RRP1,AATBC
SE_02_158400112 chr21:43751321-43782014 Sample_02_1584 Brain U87 GBM_Mock 112 8 1119 126 2 27 1972 PDXK,CSTB,RRP1,AATBC
SE_02_088400693 chr21:43754375-43783372 Sample_02_0884 Colon LoVo 693 7 1043 120 2 21 1737 PDXK,CSTB,RRP1,AATBC
SE_02_074800422 chr21:43755445-43792093 Sample_02_0748 Mammary gland HCC1599_WO 422 6 1282 160 2 37 1975 PDXK,RRP1,CSTB,AATBC
SE_02_074900525 chr21:43755517-43792060 Sample_02_0749 Mammary gland HCC1599_GSI 525 6 1275 157 2 37 1968 PDXK,RRP1,CSTB,AATBC
SE_02_039500271 chr21:43755931-43791637 Sample_02_0395 Mammary gland BT-549 271 6 1240 151 2 35 1880 RRP1,CSTB,PDXK,LOC284837
SE_02_009500438 chr21:43755969-43784225 Sample_02_0095 Mammary gland MDA-MB-468 438 4 1012 114 2 19 1629 CSTB,PDXK,LOC284837,RRP1
SE_00_002200928 chr21:43756268-43790156 Sample_00_0022 Lung lung_30y 928 9 1179 146 2 32 1758 RRP1,CSTB,PDXK,LOC284837
SE_02_040100543 chr21:43756449-43784098 Sample_02_0401 Mammary gland SUM159PT-T47D 543 6 979 110 2 18 1537 CSTB,PDXK,LOC284837,RRP1
SE_02_067201239 chr21:43756743-43783950 Sample_02_0672 Endometrium endometrium cancer_DSG 1239 5 963 106 2 18 1494 PDXK,CSTB,RRP1,AATBC
SE_02_010100751 chr21:43756754-43782827 Sample_02_0101 Peripheral blood Macrophages_GM-CSF_72h_IFN-y 751 3 924 104 2 18 1491 CSTB,PDXK,LOC284837,RRP1
SE_01_010700292 chr21:43756857-43786632 Sample_01_0107 Esophagus esophagus squamous epithelium 292 6 1041 121 2 18 1477 PDXK,CSTB,RRP1,AATBC
SE_02_072500263 chr21:43756936-43769022 Sample_02_0725 Mammary gland MCF10A-YAP5SA_ctrl 263 8 428 53 1 10 1072 PDXK,RRP1,CSTB,AATBC
SE_02_081901090 chr21:43757045-43783955 Sample_02_0819 Ovary Mucinous ovarian cancer 1090 7 953 106 2 15 1441 PDXK,CSTB,RRP1,AATBC
SE_02_141800284 chr21:43757072-43780059 Sample_02_1418 Brain SF9427 284 4 836 94 2 15 1431 PDXK,CSTB,RRP1,AATBC
SE_00_001100218 chr21:43757074-43790243 Sample_00_0011 Esophagus esophagus 218 12 1147 142 2 29 1598 RRP1,CSTB,PDXK,LOC284837
SE_02_064300258 chr21:43757130-43783367 Sample_02_0643 Mammary gland MDA-MB-436 258 10 925 104 2 15 1410 PDXK,CSTB,RRP1,AATBC
SE_02_015500100 chr21:43757216-43773095 Sample_02_0155 Brain U87_EGFRvIII_shSOX9_FBS 100 4 574 68 1 10 1003 PDXK,LOC284837,RRP1,CSTB
SE_02_064000298 chr21:43757216-43783269 Sample_02_0640 Mammary gland MDA-MB-436_DMSO 298 11 922 104 2 15 1395 PDXK,CSTB,RRP1,AATBC
SE_02_064200394 chr21:43757392-43783413 Sample_02_0642 Mammary gland MDA-MB-436_20C paclitaxel 394 7 919 102 2 14 1344 PDXK,CSTB,RRP1,AATBC
SE_02_010500793 chr21:43757414-43786733 Sample_02_0105 Skin neonatal_keratinocytes 793 4 1023 119 2 14 1339 CSTB,PDXK,LOC284837,RRP1
SE_00_004101116 chr21:43757452-43789635 Sample_00_0041 Stomach stomach_3y 1116 7 1114 135 2 17 1399 RRP1,CSTB,PDXK,LOC284837
SE_02_001000613 chr21:43757510-43781034 Sample_02_0010 Kidney A-498_emptyvector 613 5 848 93 2 14 1305 CSTB,PDXK,LOC284837,RRP1
SE_02_016100073 chr21:43757624-43779107 Sample_02_0161 Brain U87 73 5 796 87 1 14 1285 CSTB,PDXK,LOC284837,RRP1
SE_02_093001042 chr21:43757668-43782536 Sample_02_0930 Mid-gestation placenta trophoblast__SynT 1042 17 889 100 2 14 1280 PDXK,CSTB,RRP1,AATBC
SE_02_093700726 chr21:43757719-43779275 Sample_02_0937 Retinal Pigmented Epithelial RPE190_Con 726 5 801 89 1 14 1269 PDXK,CSTB,RRP1,AATBC,AGPAT3
SE_02_093801257 chr21:43757723-43779188 Sample_02_0938 Retinal Pigmented Epithelial RPE190_TnT 1257 4 794 87 1 14 1268 PDXK,CSTB,RRP1,AATBC,AGPAT3
SE_02_123000279 chr21:43757730-43783931 Sample_02_1230 Lung PC9 279 5 929 103 2 14 1264 PDXK,CSTB,RRP1,AATBC
SE_02_149400245 chr21:43758382-43782046 Sample_02_1494 Other monocyte-derived dendritic cells_0h 245 11 849 96 2 14 1153 PDXK,CSTB,RRP1,AATBC
SE_02_094700416 chr21:43758387-43784044 Sample_02_0947 Tongue Cal27 416 4 904 102 2 14 1152 PDXK,CSTB,RRP1,AATBC
SE_02_124800034 chr21:43763265-43784334 Sample_02_1248 Bladder RT4 34 3 740 77 1 5 392 CSTB,PDXK,RRP1,AATBC
SE_02_039800109 chr21:43763966-43792675 Sample_02_0398 Mammary gland MDA-MB-231-MCF-7 109 5 983 114 1 21 661 RRP1,CSTB,LOC284837,PDXK
SE_02_085900155 chr21:43764062-43784332 Sample_02_0859 Prostate PC3 155 5 715 71 1 5 392 CSTB,PDXK,RRP1,AATBC
SE_02_023700364 chr21:43764088-43791544 Sample_02_0237 Colon V389 364 6 936 107 1 21 621 RRP1,CSTB,LOC284837,PDXK
SE_02_105400615 chr21:43764146-43779652 Sample_02_1054 Esophagus SKGT4 615 5 581 56 0 5 392 CSTB,PDXK,RRP1,AATBC
SE_02_102600326 chr21:43764163-43783986 Sample_02_1026 Esophagus KYSE200 326 8 703 69 1 5 392 CSTB,PDXK,RRP1,AATBC
SE_02_105000563 chr21:43764218-43784663 Sample_02_1050 Highly metastatic osteosarcoma MG63-3_DMSO 563 12 718 72 1 5 392 CSTB,PDXK,RRP1,AATBC
SE_01_005800641 chr21:43764312-43784271 Sample_01_0058 Prostate PC-3 641 3 708 71 1 5 392 CSTB,LOC284837,PDXK,RRP1
SE_02_147000051 chr21:43764328-43786576 Sample_02_1470 Umbilical Vein H441 51 4 775 83 1 5 392 CSTB,PDXK,RRP1,AATBC
SE_02_136500520 chr21:43764348-43782735 Sample_02_1365 Pancreas AsPC1-untreated 520 4 659 67 1 5 392 CSTB,PDXK,RRP1,AATBC
SE_02_047700338 chr21:43764425-43783234 Sample_02_0477 Colon intestinal epithelial organoids_139a 338 5 666 67 1 5 392 CSTB,PDXK,RRP1,AATBC
SE_02_047800227 chr21:43764508-43783347 Sample_02_0478 Colon normal colon mucosa 227 9 666 67 1 5 392 CSTB,PDXK,RRP1,AATBC
SE_02_125800343 chr21:43764614-43785019 Sample_02_1258 Liver Pancreatic cancer cells derived from liver metastasis 343 4 724 73 1 5 392 CSTB,PDXK,RRP1,AATBC
SE_02_136700270 chr21:43764732-43784920 Sample_02_1367 Pancreas Capan1-untreated 270 5 712 72 1 5 392 CSTB,PDXK,RRP1,AATBC
SE_02_127500616 chr21:43764835-43782669 Sample_02_1275 Prostate PC3_Vorinostat 616 8 642 67 1 5 392 CSTB,PDXK,RRP1,AATBC
SE_02_082601398 chr21:43765340-43786106 Sample_02_0826 Stomach gastric tumor 1398 12 726 79 1 5 392 CSTB,PDXK,RRP1,AATBC
SE_02_035400667 chr21:43766239-43784145 Sample_02_0354 Colon Colo205 667 3 651 68 1 5 392 CSTB,LOC284837,PDXK,RRP1
SE_02_136200769 chr21:43766461-43784625 Sample_02_1362 Bladder UMUC1_sonic_pSIN-puro H1146A/E1148A-mutant UTX 769 3 650 68 1 5 392 CSTB,PDXK,RRP1,AATBC
SE_02_125400042 chr21:43766552-43785729 Sample_02_1254 Bladder Bladder tumor Basal1 42 2 681 72 1 5 392 CSTB,PDXK,RRP1,AATBC
SE_02_024200756 chr21:43766620-43784851 Sample_02_0242 Colon V481 756 3 655 68 1 5 392 CSTB,LOC284837,PDXK,RRP1
SE_02_024100467 chr21:43766633-43784081 Sample_02_0241 Colon V456 467 2 632 65 1 5 392 CSTB,LOC284837,PDXK,RRP1
SE_02_098800786 chr21:43766683-43778927 Sample_02_0988 Blood K562_EPZ 786 2 481 48 0 5 392 CSTB,PDXK,RRP1,AATBC
SE_02_137200286 chr21:43766718-43779906 Sample_02_1372 Pancreas PSN1-untreated 286 6 505 53 1 5 392 CSTB,PDXK,RRP1,AATBC
SE_02_136101194 chr21:43766733-43782189 Sample_02_1361 Bladder UMUC1_sonic_pSIN-puro_WTUTX 1194 4 571 59 1 5 392 CSTB,PDXK,RRP1,AATBC
SE_02_109900928 chr21:43766884-43779246 Sample_02_1099 Haematopoietic and lymphoid tissue bone marrow K562_DMSO_noIFNG 928 4 486 50 0 5 392 CSTB,PDXK,RRP1,AATBC
SE_02_024000722 chr21:43767057-43784809 Sample_02_0240 Colon V429_2 722 8 635 65 1 5 392 CSTB,LOC284837,PDXK,RRP1
SE_02_002100793 chr21:43767070-43790399 Sample_02_0021 Colon V429 793 3 808 98 1 19 559 RRP1,CSTB,LOC284837,PDXK
SE_02_018500930 chr21:43767134-43779352 Sample_02_0185 Skin UACC257 930 3 481 48 0 5 392 CSTB,LOC284837,PDXK,RRP1
SE_01_005900252 chr21:43767255-43784452 Sample_01_0059 Lung PC-9 252 2 623 64 1 5 392 CSTB,LOC284837,PDXK,RRP1
SE_02_018200444 chr21:43767361-43779279 Sample_02_0182 melanoma LOX-IMVI 444 5 471 47 0 5 392 CSTB,LOC284837,PDXK,RRP1
SE_02_094800261 chr21:43767377-43784473 Sample_02_0948 Pharyng Detroit562 261 2 615 63 1 5 392 CSTB,PDXK,RRP1,AATBC
SE_02_123100302 chr21:43767443-43783429 Sample_02_1231 Lung PC9_siMED13L-1 302 4 577 59 1 5 392 CSTB,PDXK,RRP1,AATBC
SE_02_019200051 chr21:43767457-43782888 Sample_02_0192 Stomach MKN45 51 3 558 59 1 5 392 CSTB,LOC284837,PDXK,RRP1
SE_02_044801005 chr21:43767480-43779608 Sample_02_0448 Bone MNNG 1005 3 470 48 0 5 392 CSTB,PDXK,RRP1,AATBC
SE_02_123300255 chr21:43767490-43783827 Sample_02_1233 Lung PC9_miR-4497 mimic 255 5 592 61 1 5 392 CSTB,PDXK,RRP1,AATBC
SE_02_071400483 chr21:43767537-43783523 Sample_02_0714 Pancreas SUIT2_MTV 483 4 578 59 1 5 392 CSTB,PDXK,RRP1,AATBC
SE_02_123200229 chr21:43767538-43784038 Sample_02_1232 Lung PC9_siMED13L-2 229 4 594 61 1 5 392 CSTB,PDXK,RRP1,AATBC
SE_02_136600764 chr21:43767544-43785006 Sample_02_1366 Pancreas BxPC3-untreated 764 10 625 65 1 5 392 CSTB,PDXK,RRP1,AATBC
SE_02_070400517 chr21:43767556-43782890 Sample_02_0704 Pancreas HPAFII WT 517 5 553 59 1 5 392 CSTB,PDXK,RRP1,AATBC
SE_02_070600475 chr21:43767577-43782864 Sample_02_0706 Pancreas SUIT2 WT 475 7 553 59 1 5 392 CSTB,PDXK,RRP1,AATBC
SE_02_141100159 chr21:43767803-43781135 Sample_02_1411 Colon KM12C 159 6 495 49 1 5 392 CSTB,PDXK,RRP1,AATBC
SE_02_021601122 chr21:43767806-43783846 Sample_02_0216 Skin NHEK_scramble 1122 5 580 59 1 5 392 CSTB,LOC284837,PDXK,RRP1
SE_02_149500222 chr21:43767978-43778825 Sample_02_1495 Other monocyte-derived dendritic cells_R848_1h 222 7 426 42 0 5 392 CSTB,PDXK,RRP1,AATBC
SE_02_136900035 chr21:43768124-43783305 Sample_02_1369 Pancreas P4057-untreated 35 4 545 57 1 5 392 CSTB,PDXK,RRP1,AATBC
SE_02_122100656 chr21:43778214-43784726 Sample_02_1221 Bone marrow KMS11 656 2 203 28 1 0 0 RRP1,CSTB,AATBC
Genomic distribution of SEs associated with CSTB
Genome Browser

The strength of the tissue affected by the gene

Expression of CSTB

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)