Gene overview
| Strategies/Algorithm: | closest | Ensembl ID: | ENSG00000120885 |
| Gene: | CLU | Gene type: | protein_coding |
| Strand: | - | External links: |
|
| Genomic region: | chr8:27596917-27614700 | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_00_002001076 | chr8:27582307-27626989 |
Sample_00_0020 | Large intestine | large-intestine_108d | 1076 | 7 | 1239 | 98 | 13 | 106 | 1214 | CLU,SCARA3 |
| SE_02_003200306 | chr8:27582748-27616225 |
Sample_02_0032 | Pancreas | pancreatic-islets-M | 306 | 8 | 958 | 79 | 11 | 97 | 1214 | CLU,SCARA3 |
| SE_00_003600719 | chr8:27582816-27626978 |
Sample_00_0036 | Small intestine | small-intestine_108days | 719 | 7 | 1228 | 98 | 13 | 106 | 1214 | CLU,SCARA3 |
| SE_02_003300605 | chr8:27582855-27618237 |
Sample_02_0033 | Pancreas | pancreatic-islets-F | 605 | 4 | 1005 | 86 | 11 | 104 | 1214 | CLU,SCARA3 |
| SE_00_001400252 | chr8:27582990-27615568 |
Sample_00_0014 | Heart left ventricle | heart-left-ventricle | 252 | 4 | 941 | 78 | 11 | 94 | 1214 | CLU,SCARA3 |
| SE_01_008201059 | chr8:27583015-27617608 |
Sample_01_0082 | Right lobe of liver | right-lobe-of-liver | 1059 | 9 | 986 | 85 | 11 | 104 | 1214 | CLU,SCARA3 |
| SE_02_032600423 | chr8:27583031-27615741 |
Sample_02_0326 | Liver | hepatocytes_d3 | 423 | 6 | 946 | 79 | 11 | 94 | 1214 | CLU,SCARA3 |
| SE_02_032700244 | chr8:27583067-27615467 |
Sample_02_0327 | Liver | hepatocytes_d6 | 244 | 7 | 933 | 78 | 11 | 94 | 1214 | CLU,SCARA3 |
| SE_02_032500257 | chr8:27583091-27615853 |
Sample_02_0325 | Liver | hepatocytes_d1 | 257 | 7 | 945 | 79 | 11 | 94 | 1214 | CLU,SCARA3 |
| SE_02_028600733 | chr8:27583457-27626908 |
Sample_02_0286 | Liver | HuH7_IL-1alpha_1h | 733 | 6 | 1206 | 94 | 13 | 106 | 1214 | CLU,SCARA3 |
| SE_02_004700602 | chr8:27591517-27618565 |
Sample_02_0047 | Pancreatic endoderm | IIDP/donor790 | 602 | 6 | 753 | 68 | 8 | 90 | 1214 | CLU,SCARA3 |
| SE_01_000100138 | chr8:27592087-27604373 |
Sample_01_0001 | Prostate | 22Rv1 | 138 | 3 | 352 | 29 | 4 | 16 | 396 | CLU,SCARA3 |
| SE_01_000200086 | chr8:27592135-27604267 |
Sample_01_0002 | Prostate | 22Rv1_10nM17beta-hydroxy-5alpha-androstan-3-one | 86 | 3 | 344 | 29 | 4 | 15 | 376 | CLU,SCARA3 |
| SE_02_028500391 | chr8:27594179-27615957 |
Sample_02_0285 | Liver | HuH7_untreat | 391 | 3 | 591 | 49 | 8 | 79 | 1214 | CLU,SCARA3 |
| SE_02_004600698 | chr8:27594348-27620903 |
Sample_02_0046 | Embryo endodermal | CyT49_ES_D10 | 698 | 6 | 698 | 60 | 9 | 90 | 1214 | CLU,SCARA3 |
| SE_02_085700437 | chr8:27595731-27628237 |
Sample_02_0857 | Glioblastoma | Glioblastoma neurosphere cell_HF-3035 | 437 | 7 | 859 | 68 | 9 | 90 | 1214 | CLU,MIR6843,SCARA3 |
| SE_02_096900729 | chr8:27606397-27617474 |
Sample_02_0969 | Brain | H3.3K27M_PL637 | 729 | 3 | 282 | 29 | 4 | 58 | 608 | CLU,MIR6843,SCARA3 |
| SE_02_119100773 | chr8:27606792-27617925 |
Sample_02_1191 | Brain | GBM25 | 773 | 3 | 284 | 29 | 4 | 56 | 551 | CLU,MIR6843,SCARA3 |
| SE_02_059401242 | chr8:27607394-27618700 |
Sample_02_0594 | iPSC-derived | neural progenitors | 1242 | 1 | 298 | 28 | 3 | 55 | 551 | CLU,MIR6843,SCARA3 |
| SE_02_097900769 | chr8:27607591-27617973 |
Sample_02_0979 | Brain | JN14-BS1_H3.3K27M | 769 | 3 | 275 | 26 | 3 | 55 | 551 | CLU,MIR6843,SCARA3 |
| SE_00_003800543 | chr8:27607617-27615820 |
Sample_00_0038 | Spinal cord | spinal-cord_108d | 543 | 1 | 225 | 19 | 3 | 45 | 551 | CLU,SCARA3 |
| SE_00_001200609 | chr8:27607634-27612982 |
Sample_00_0012 | Embryo | H1-hESC | 609 | 2 | 152 | 14 | 3 | 22 | 422 | CLU,SCARA3 |
| SE_02_095500287 | chr8:27607684-27617970 |
Sample_02_0955 | Brain | IDH1_2469 | 287 | 5 | 274 | 26 | 3 | 55 | 551 | CLU,MIR6843,SCARA3 |
| SE_02_119300310 | chr8:27607699-27618037 |
Sample_02_1193 | Brain | GBM27 | 310 | 1 | 277 | 26 | 3 | 55 | 551 | CLU,MIR6843,SCARA3 |
| SE_02_141000777 | chr8:27607725-27618086 |
Sample_02_1410 | Brain | GSC6 | 777 | 1 | 278 | 26 | 3 | 55 | 551 | CLU,MIR6843,SCARA3 |
| SE_02_118300470 | chr8:27607779-27617990 |
Sample_02_1183 | Brain | GBM12 | 470 | 2 | 275 | 26 | 3 | 55 | 551 | CLU,MIR6843,SCARA3 |
| SE_02_120400755 | chr8:27607797-27617941 |
Sample_02_1204 | Brain | NB2 | 755 | 3 | 271 | 25 | 3 | 55 | 551 | CLU,MIR6843,SCARA3 |
| SE_02_120200600 | chr8:27607807-27617932 |
Sample_02_1202 | Brain | GBM38 | 600 | 4 | 270 | 25 | 3 | 55 | 551 | CLU,MIR6843,SCARA3 |
| SE_02_117900396 | chr8:27607808-27617859 |
Sample_02_1179 | Brain | GBM08 | 396 | 4 | 268 | 25 | 3 | 55 | 551 | CLU,MIR6843,SCARA3 |
| SE_02_118600998 | chr8:27607850-27617906 |
Sample_02_1186 | Brain | GBM15 | 998 | 3 | 269 | 25 | 3 | 55 | 551 | CLU,MIR6843,SCARA3 |
| SE_02_121100391 | chr8:27607880-27617927 |
Sample_02_1211 | Brain | GBM21 | 391 | 3 | 268 | 25 | 3 | 55 | 551 | CLU,MIR6843,SCARA3 |
| SE_02_085400681 | chr8:27607899-27618019 |
Sample_02_0854 | Glioblastoma | Glioblastoma neurosphere cell_HF-2354 | 681 | 3 | 271 | 25 | 3 | 55 | 551 | CLU,MIR6843,SCARA3 |
| SE_02_119200473 | chr8:27607975-27617942 |
Sample_02_1192 | Brain | GBM26 | 473 | 2 | 267 | 25 | 3 | 55 | 551 | CLU,MIR6843,SCARA3 |
| SE_02_079400226 | chr8:27608122-27617938 |
Sample_02_0794 | Brain | 1552 | 226 | 4 | 265 | 24 | 3 | 55 | 551 | CLU,MIR6843,SCARA3 |
| SE_02_119800610 | chr8:27608272-27617947 |
Sample_02_1198 | Brain | GBM34 | 610 | 2 | 262 | 24 | 3 | 55 | 551 | CLU,MIR6843,SCARA3 |
| SE_02_035000579 | chr8:27608421-27617306 |
Sample_02_0350 | Dorsolateral prefrontal cortex | dorsolateral-prefrontal-cortex | 579 | 5 | 237 | 21 | 3 | 54 | 551 | CLU,SCARA3 |
| SE_02_097800372 | chr8:27608471-27618133 |
Sample_02_0978 | Brain | 2168_IDH1 | 372 | 4 | 261 | 23 | 3 | 55 | 551 | CLU,MIR6843,SCARA3 |
| SE_02_118700814 | chr8:27609939-27615916 |
Sample_02_1187 | Brain | GBM16 | 814 | 1 | 168 | 11 | 2 | 42 | 459 | CLU,MIR6843,SCARA3 |
| SE_02_138800790 | chr8:27610212-27617880 |
Sample_02_1388 | Peripheral blood | JB6_ALK+ | 790 | 2 | 205 | 17 | 1 | 52 | 459 | CLU,MIR6843,SCARA3 |
| SE_02_117401049 | chr8:27610567-27617879 |
Sample_02_1174 | Brain | GBM02 | 1049 | 2 | 185 | 16 | 1 | 50 | 405 | CLU,MIR6843,SCARA3 |
| SE_02_158401420 | chr8:27610870-27620904 |
Sample_02_1584 | Brain | U87 GBM_Mock | 1420 | 2 | 251 | 21 | 2 | 51 | 350 | CLU,MIR6843,SCARA3 |
| SE_02_113600506 | chr8:27611549-27622219 |
Sample_02_1136 | Bone | U2OS-anaphase/telophase | 506 | 3 | 275 | 20 | 1 | 42 | 207 | CLU,MIR6843,SCARA3 |
Genomic distribution of SEs associated with CLU