Gene overview
| Strategies/Algorithm: | closest | Ensembl ID: | ENSG00000151882 |
| Gene: | CCL28 | Gene type: | protein_coding |
| Strand: | - | External links: |
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| Genomic region: | chr5:43376645-43412391 | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_02_103602486 | chr5:43382831-43434740 |
Sample_02_1036 | Mammary gland | HCC70_XY018 | 2486 | 14 | 1318 | 157 | 7 | 34 | 296 | CCL28,C5ORF28 |
| SE_02_053200096 | chr5:43385885-43447936 |
Sample_02_0532 | Mammary gland | T47D | 96 | 20 | 1587 | 193 | 9 | 43 | 412 | CCL28,C5ORF28 |
| SE_02_009500083 | chr5:43390045-43436523 |
Sample_02_0095 | Mammary gland | MDA-MB-468 | 83 | 6 | 1190 | 142 | 8 | 25 | 172 | CCL28,C5ORF28 |
| SE_02_016600319 | chr5:43395262-43434067 |
Sample_02_0166 | Mammary gland | HCC1954_Parental | 319 | 4 | 1037 | 130 | 7 | 25 | 172 | CCL28,C5ORF28 |
| SE_02_016700412 | chr5:43395262-43434067 |
Sample_02_0167 | Mammary gland | HCC1954_LCC2 | 412 | 4 | 1037 | 130 | 7 | 25 | 172 | CCL28,C5ORF28 |
| SE_02_008600794 | chr5:43395881-43435074 |
Sample_02_0086 | Pancreas | CAPAN1 | 794 | 6 | 1046 | 132 | 7 | 25 | 172 | CCL28,C5ORF28 |
| SE_01_008700783 | chr5:43396036-43434444 |
Sample_01_0087 | Thyroid gland | thyroid-gland | 783 | 5 | 1031 | 131 | 7 | 25 | 172 | CCL28,C5ORF28 |
| SE_02_023700595 | chr5:43396151-43433967 |
Sample_02_0237 | Colon | V389 | 595 | 9 | 1019 | 130 | 7 | 25 | 172 | CCL28,C5ORF28 |
| SE_02_039400179 | chr5:43399001-43436200 |
Sample_02_0394 | Mammary gland | T-47D_2 | 179 | 9 | 1002 | 121 | 8 | 25 | 84 | CCL28,C5ORF28 |
| SE_02_109200441 | chr5:43399934-43433812 |
Sample_02_1092 | Mammary gland | T47D_shCtrl_24hr | 441 | 21 | 921 | 111 | 7 | 25 | 84 | CCL28 |
| SE_02_123400138 | chr5:43400015-43433861 |
Sample_02_1234 | Mammary gland | T47D_Full | 138 | 22 | 919 | 110 | 7 | 25 | 84 | CCL28 |
| SE_02_108600514 | chr5:43400018-43433860 |
Sample_02_1086 | Mammary gland | T47D_shCtrl_0hr | 514 | 17 | 919 | 110 | 7 | 25 | 84 | CCL28 |
| SE_02_074800029 | chr5:43400121-43435475 |
Sample_02_0748 | Mammary gland | HCC1599_WO | 29 | 6 | 956 | 114 | 7 | 25 | 84 | CCL28,C5ORF28 |
| SE_02_108800271 | chr5:43400323-43434028 |
Sample_02_1088 | Mammary gland | T47D_shCtrl_45min | 271 | 15 | 912 | 109 | 7 | 25 | 84 | CCL28,C5ORF28 |
| SE_02_074900086 | chr5:43401890-43434811 |
Sample_02_0749 | Mammary gland | HCC1599_GSI | 86 | 13 | 885 | 107 | 7 | 25 | 84 | CCL28,C5ORF28 |
| SE_02_109000394 | chr5:43401932-43433740 |
Sample_02_1090 | Mammary gland | T47D_shCtrl_8hr | 394 | 10 | 863 | 104 | 7 | 25 | 84 | CCL28 |
| SE_01_010500381 | chr5:43408883-43434368 |
Sample_01_0105 | Thyroid gland | thyroid gland_54y | 381 | 12 | 671 | 77 | 6 | 25 | 84 | CCL28,C5ORF28 |
| SE_02_151300867 | chr5:43409388-43433835 |
Sample_02_1513 | Lung | Transitional AT2->1 cells | 867 | 6 | 642 | 75 | 6 | 25 | 84 | CCL28 |
| SE_02_146400297 | chr5:43409903-43432693 |
Sample_02_1464 | Ovary | CAOV4 | 297 | 10 | 594 | 71 | 6 | 24 | 84 | CCL28 |
| SE_02_116700888 | chr5:43419896-43433789 |
Sample_02_1167 | Biliary | H69_TGF Vehicle_1 | 888 | 8 | 338 | 35 | 3 | 10 | 0 | CCL28 |
| SE_02_116800927 | chr5:43420259-43433807 |
Sample_02_1168 | Biliary | H69_TGF Vehicle_2 | 927 | 7 | 327 | 34 | 1 | 10 | 0 | CCL28 |
| SE_02_061900659 | chr5:43420748-43433759 |
Sample_02_0619 | Head and Neck | HPV+ HNSCC_SCC-047 | 659 | 2 | 315 | 32 | 1 | 10 | 0 | CCL28 |
| SE_02_151100511 | chr5:43421535-43434085 |
Sample_02_1511 | Lung | H3122_untreated | 511 | 6 | 292 | 27 | 1 | 10 | 0 | CCL28,C5ORF28 |
| SE_02_150900297 | chr5:43421635-43433607 |
Sample_02_1509 | Lung | H3122_LR | 297 | 9 | 281 | 23 | 1 | 10 | 0 | CCL28 |
Genomic distribution of SEs associated with CCL28