SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_01_004700039
Species: Human
Data source: ENCODE
Biosample type: In vitro differentiated cell
Tissue type: Embryo
Biosample name: mid-neurogenesis-radial-glial-cells
Genomic region: chr1:205273253-205315338
Size: 42085
Super-enhancer rank 39
Number of SE elements: 5
ChIP density(Case|Control): 10895.8065|3871.82
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NUAK2;
ROSE Overlap NUAK2; TMCC2;
ROSE Proximal KLHDC8A;
ROSE Closest NUAK2;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_004700039 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers