About Enhancer
| Enhancer ID: |
|
E_02_084 |
| Enhancer symbol: |
|
-- |
| Species: |
|
Mouse |
| Position : |
|
chr6:52199038-52200503
   |
| Biosample name: |
|
Lung,Stomach |
| Experiment class : |
|
Low+High throughput |
| Enhancer type: |
|
Enhancer |
| Disease: |
|
-- |
| DO: |
|
-- |
| Mesh: |
|
-- |
| Distance from TSS: |
|
>2KB |
| Pubmed ID: |
|
24705708 |
| Enhancer experiment: |
|
EMSA,ChIP |
| Enhancer experiment description: |
|
A 2.1-kb mesodermal (MES) enhancer important for Hoxa5 paraxial and lateral plate mesoderm expression in the cervico-upper thoracic region of the A-P axis is positioned 39 of the Hoxa5 gene. |
About Target gene
| Target gene : |
|
Vegfa(MVCD1,VEGF,VPF) |
| Strong evidence: |
|
-- |
| Less strong evidence: |
|
Transgenic mice,EMSA,qRT-PCR |
| Target gene experiment description: |
|
A 1.5-kb XbaI-XbaI DNA fragment located in Hoxa4-Hoxa5 intergenic sequences at 3.0-kb upstream the Hoxa4 gene (positions +9351-bp to +10816-bp) was able to target Hoxa5 expression in lung and stomach. |
About TF
| TF name : |
|
Yy1(DELTA,GADEVS,INO80S,NF-E1,UCRBP,YIN-YANG-1) |
| TF experiment: |
|
ChIP,qPCR |
| TF experiment description: |
|
In summary, YY1 acts as a positive regulator of Hoxa5 lung, stomach and intestine expression during embryogenesis. |
About Function
| Enhancer function : |
-- |
| Enhancer function experiment: |
-- |
Enhancer function
experiment description: |
-- |
About SNP
| SNP ID: |
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-- |
| SNP position: |
|
-- |
Enhancer associated network
The number on yellow line represents the distance between enhancer and target gene
Expression of target genes for the enhancer
Enhancer associated SNPs
