About Enhancer
| Enhancer ID: | E_01_168 | |
| Enhancer symbol: | -- | |
| Species: | Human | |
| Position : | chr3:11249688-11250280   |
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| Biosample name: | GM12878,CD4+ T Cell | |
| Experiment class : | Low+High throughput |
| Enhancer type: | Enhancer | |
| Disease: | -- | |
| DO: | -- | |
| Mesh: | -- | |
| Distance from TSS: | >2KB | |
| Pubmed ID: | 24703844 |
| Enhancer experiment: | Hi-C,4C,Luciferase Reporter Assay,ChIP-seq | |
| Enhancer experiment description: | By hierarchical clustering of the histone modification profiles,Alu elements, but not the other three transposons, cluster together with RefSeq genes, putative enhancers,and DNase I hypersensitive sites (DHSs).Although we removed TSS -10 and +5 kb regions from DHS,the DHS regions may still contain not only enhancers but also some promoters,as shown by the high level of H3K4me3,a modification exclusively localized to promoters. H3K4me3 is excluded on all four transposons,consistent with their underrepresentation at promoter regions. |
About Target gene
| Target gene : | HRH1(H1-R,H1R,HH1R,hisH1) | |
| Strong evidence: | -- | |
| Less strong evidence: | Luciferase Reporter Assay | |
| Target gene experiment description: | Two examples of Alus with specific P300, H3K27ac, and H3K4me1 peaks in one tissue but not in other tissues are shown in Figures 2D and 2E. Because P300, H3K27ac, and H3K4me1 peaks do not coexist on other Alus and control re_x0002_peats in the same region, the high active modification levels are unlikely to be conferred by genomic background. |
About TF
| TF name : | -- | |
| TF experiment: | -- | |
| TF experiment description: | -- |
About Function
| Enhancer function : | -- |
| Enhancer function experiment: | -- |
| Enhancer function experiment description: |
-- |
About SNP
| SNP ID: | -- | |
| SNP position: | -- |
| SNP experiment: | -- |
Enhancer associated network
The number on yellow line represents the distance between enhancer and target gene
