Enhancer Detail

Comprehensive information about experimentally validated enhancers

About Enhancer
Enhancer ID: E_03250
Species: Mus musculus
Position : chr10:52386564-52388864
Year: 2014
Title: A regulatory network controls nephrocan expression and midgut patterning.
Genome Build: mm10
Enhancer Type: Enhancer
Condition: Normal
PMID:  25209250
Tissue: definitive endoderm
Tissue Ontology ID: UBERON:0005439
Cell Source: transient transgenic mouse embryos
Cell Type: endodermal cell
Cell Ontology ID: CL:0000223
Experiment Type: Promoter/enhancer-driven transgenic reporter assay; In vivo functional validation
Low Throughput Method: 2.3-kb Nepn upstream-region LacZ transgenic reporter assay; whole-mount staining; In vivo phenotyping
About Target Gene
Target gene : Nepn
About TF
TF name : NA
About Regulatory State
Regulatory State : Active
Upstream Pathway Annotation of TF
GeneName Pathway Name Source Gene Number
Enhancer Associated Network
Overlapping Enhancers (mm10) 4 found
Enhancer ID Position Tissue Cell Disease
E_03184 chr10:52388022-52388224 definitive endoderm malignant cell NA
E_03185 chr10:52388022-52388224 definitive endoderm malignant cell NA
E_03216 chr10:52388022-52388224 NA NA NA
E_03217 chr10:52388022-52388224 NA NA NA
Expression of Target Genes for the Enhancer