Enhancer Detail

Comprehensive information about experimentally validated enhancers

About Enhancer
Enhancer ID: E_03160
Species: Mus musculus
Position : chr8:120777048-120777744
Year: 2019
Title: An Nfil3-Zeb2-Id2 pathway imposes Irf8 enhancer switching during cDC1 development.
Genome Build: mm10
Enhancer Type: Enhancer
Condition: Normal
PMID:  31406377
Tissue: bone marrow
Tissue Ontology ID: UBERON:0002371
Cell Source: common dendritic cell progenitor / pre-cDC1
Cell Type: dendritic cell progenitor
Experiment Type: Stage-specific enhancer assay; enhancer genetic perturbation; E-box mutagenesis
High Throughput Method: Single-cell RNA-seq; ATAC-seq
Low Throughput Method: Enhancer reporter; E-box mutagenesis; genetic epistasis; flow cytometry; enhancer-null mouse analysis
About Target Gene
Target gene : Irf8
About TF
TF name : Tcf3
About Regulatory State
Regulatory State : Active
Upstream Pathway Annotation of TF
GeneName Pathway Name Source Gene Number
Tcf3 CDO in myogenesis reactome 29
Tcf3 ID netpath 38
Tcf3 Notch-mediated HES/HEY network pid 48
Tcf3 Notch netpath 76
Tcf3 p38 signaling mediated by MAPKAP kinases pid 21
Tcf3 Regulation of nuclear SMAD2/3 signaling pid 82
Tcf3 Wnt netpath 118
Tcf3 Hs_Ectoderm_Differentiation_WP2858_89329 wikipathways 56
Enhancer Associated Network
Overlapping Enhancers (mm10) 3 found
Enhancer ID Position Tissue Cell Disease
E_01164 chr8:120777048-120777744 bone marrow Common dendritic progenitor NA
E_01165 chr8:120777048-120777744 bone marrow common dendritic progenitor / pre-cDC1 NA
E_01167 chr8:120777048-120777744 bone marrow common dendritic progenitor / pre-cDC1 NA
Expression of Target Genes for the Enhancer