About Enhancer
| Enhancer ID: | E_02_0488 |
| Species: | human |
| Position : | chr2:113096632-113098632   |
| Biosample name: | |
| Experiment class : | High+Lowthroughput |
| Enhancer type: | Enhancer |
| Disease: | Cancer |
| Pubmed ID: | 30098338 |
| Enhancer experiment: | Chip qPCR, RT qPCR, chromatin immunoprecipitation reaction, 3-C assay, chip SEQ, DNase - seq |
| Enhancer experiment description: | We specifically targeted regions approximately 4kb, 8kb and 24kb from the IL1RN promoter that do not contain any feature of a regulatory element based on ENCODE H3K27ac and transcription factor ChIP-Seq data (Fig. 1b, Fig.S1a). |
About Target gene
| Target gene : | IL1RN |
| Strong evidence: | qRT-PCR,qPCR,ChIP,3C |
| Less strong evidence: | RNA-Seq |
| Target gene experiment description: | We specifically targeted regions approximately 4kb, 8kb and 24kb from the IL1RN promoter that do not contain any feature of a regulatory element based on ENCODE H3K27ac and transcription factor ChIP-Seq data (Fig. 1b, Fig.S1a). |
About TF
| TF name : | -- |
| TF experiment: | ChIP-qPCR, RT-qPCR,?????????,3-C Assay,ChIP-Seq,DNase- seq |
| TF experiment description: | We specifically targeted regions approximately 4kb, 8kb and 24kb from the IL1RN promoter that do not contain any feature of a regulatory element based on ENCODE H3K27ac and transcription factor ChIP-Seq data (Fig. 1b, Fig.S1a). |
About Function
| Enhancer function : | We specifically targeted regions approximately 4kb, 8kb and 24kb from the IL1RN promoter that do not contain any feature of a regulatory element based on ENCODE H3K27ac and transcription factor ChIP-Seq data (Fig. 1b, Fig.S1a). |
| Enhancer function experiment: | Immunohistochemical staining |
| Enhancer function experiment description: |
We specifically targeted regions approximately 4kb, 8kb and 24kb from the IL1RN promoter that do not contain any feature of a regulatory element based on ENCODE H3K27ac and transcription factor ChIP-Seq data (Fig. 1b, Fig.S1a). |
About SNP
| SNP ID: | -- |
Upstream Pathway Annotation of TF
| GeneName | Pathway Name | Source | Gene Number |
|---|
Enhancer associated network
The number on yellow line represents the distance between enhancer and
target gene