About Enhancer
| Enhancer ID: | E_02_0231 |
| Species: | human |
| Position : | chr3:101825274-101827274   |
| Biosample name: | |
| Experiment class : | High+Lowthroughput |
| Enhancer type: | Enhancer |
| Disease: | Mammary cancer |
| Pubmed ID: | 31477927 |
| Enhancer experiment: | PCR,Flow cytometry |
| Enhancer experiment description: | We checked typical examples of the short- and long-lived mRNAs NFKBIZ35 and GAPDH, respectively, in MCF-7 cells. The signal from NFKBIZ (Figs. 2a and 3a,b) was higher in NET_x0002_CAGE than in CAGE, whereas the opposite was true for GAPDH (Figs. 2a and 3b). |
About Target gene
| Target gene : | NFKBIZ,GAPDH |
| Strong evidence: | qRT-PCR,qPCR,ChIP,3C |
| Less strong evidence: | RNA-Seq |
| Target gene experiment description: | We checked typical examples of the short- and long-lived mRNAs NFKBIZ35 and GAPDH, respectively, in MCF-7 cells. The signal from NFKBIZ (Figs. 2a and 3a,b) was higher in NET_x0002_CAGE than in CAGE, whereas the opposite was true for GAPDH (Figs. 2a and 3b).;We checked typical examples of the short- and long-lived mRNAs NFKBIZ35 and GAPDH, respectively, in MCF-7 cells. The signal from NFKBIZ (Figs. 2a and 3a,b) was higher in NET_x0002_CAGE than in CAGE, whereas the opposite was true for GAPDH (Figs. 2a and 3b). |
About TF
| TF name : | -- |
| TF experiment: | PCR,Flow cytometry |
| TF experiment description: | We checked typical examples of the short- and long-lived mRNAs NFKBIZ35 and GAPDH, respectively, in MCF-7 cells. The signal from NFKBIZ (Figs. 2a and 3a,b) was higher in NET_x0002_CAGE than in CAGE, whereas the opposite was true for GAPDH (Figs. 2a and 3b).;We checked typical examples of the short- and long-lived mRNAs NFKBIZ35 and GAPDH, respectively, in MCF-7 cells. The signal from NFKBIZ (Figs. 2a and 3a,b) was higher in NET_x0002_CAGE than in CAGE, whereas the opposite was true for GAPDH (Figs. 2a and 3b). |
About Function
| Enhancer function : | We checked typical examples of the short- and long-lived mRNAs NFKBIZ35 and GAPDH, respectively, in MCF-7 cells. The signal from NFKBIZ (Figs. 2a and 3a,b) was higher in NET_x0002_CAGE than in CAGE, whereas the opposite was true for GAPDH (Figs. 2a and 3b). |
| Enhancer function experiment: | Immunohistochemical staining |
| Enhancer function experiment description: |
We checked typical examples of the short- and long-lived mRNAs NFKBIZ35 and GAPDH, respectively, in MCF-7 cells. The signal from NFKBIZ (Figs. 2a and 3a,b) was higher in NET_x0002_CAGE than in CAGE, whereas the opposite was true for GAPDH (Figs. 2a and 3b). |
About SNP
| SNP ID: | -- |
Upstream Pathway Annotation of TF
| GeneName | Pathway Name | Source | Gene Number |
|---|
Enhancer associated network
The number on yellow line represents the distance between enhancer and
target gene