About Enhancer
| Enhancer ID: | E_02668 |
| Species: | Mus musculus |
| Position : | chr7:19411995-19412089   |
| Year: | 2011 |
| Title: | Differentiation and fiber type-specific activity of a muscle creatine kinase intronic enhancer. |
| Genome Build: | mm10 |
| Enhancer Type: | Enhancer |
| Condition: | Normal |
| PMID: | 21797989 |
| Tissue: | skeletal muscle tissue |
| Tissue Ontology ID: | UBERON:0001134 |
| Cell Source: | MM14 skeletal muscle cells |
| Cell Type: | skeletal muscle myoblast/myocyte |
| Experiment Type: | Enhancer activity assay; TF binding assay; transgenic functional validation |
| High Throughput Method: | ChIP-seq |
| Low Throughput Method: | ChIP; CAT reporter assay; motif deletion/mutagenesis; transgenic mouse reporter assay |
About Target Gene
| Target gene : | Ckm |
About TF
| TF name : | Myod1 |
About Regulatory State
| Regulatory State : | Active |
Upstream Pathway Annotation of TF
| GeneName | Pathway Name | Source | Gene Number |
|---|---|---|---|
| Myod1 | C-MYB transcription factor network | pid | 87 |
| Myod1 | CDO in myogenesis | reactome | 29 |
| Myod1 | ID | netpath | 38 |
| Myod1 | Notch-mediated HES/HEY network | pid | 48 |
| Myod1 | Regulation of nuclear SMAD2/3 signaling | pid | 82 |
| Myod1 | Regulation of retinoblastoma protein | pid | 67 |
| Myod1 | Signaling events mediated by HDAC Class III | pid | 41 |
| Myod1 | Hs_ID_signaling_pathway_WP53_67360 | wikipathways | 8 |
Enhancer Associated Network
Overlapping Enhancers (mm10)
4 found
| Enhancer ID | Position | Tissue | Cell | Disease |
|---|---|---|---|---|
| E_02648 | chr7:19411994-19412088 | skeletal muscle tissue | myoblast | NA |
| E_02649 | chr7:19411994-19412088 | skeletal muscle tissue | myoblast | NA |
| E_02667 | chr7:19411995-19412089 | skeletal muscle tissue | skeletal muscle myoblast/myocyte | NA |
| E_02669 | chr7:19411995-19412089 | skeletal muscle tissue | skeletal muscle myoblast/myocyte | NA |
Expression of Target Genes for the Enhancer