Enhancer Detail

Comprehensive information about experimentally validated enhancers

About Enhancer
Enhancer ID: E_02095
Species: Mus musculus
Position : chr8:28094779-28095609
Year: 2020
Title: HOX paralogs selectively convert binding of ubiquitous transcription factors into tissue-specific patterns of enhancer activation.
Genome Build: mm9
Enhancer Type: Enhancer
Condition: Normal
PMID:  33315856
Tissue: pharyngeal arch
Tissue Ontology ID: UBERON:0002539
Cell Source: NIH 3T3
CVCL ID: CVCL_0594
Cell Type: fibroblast
Cell Ontology ID: CL:0000057
Experiment Type: Enhancer activity assay; TF binding assay; In vivo functional validation
High Throughput Method: Hoxa2 ChIP-seq; Hoxa3 ChIP-seq; PBX ChIP-seq; MEIS ChIP-seq; H3K27ac ChIP-seq
Low Throughput Method: Luciferase Reporter Assay; ChIP-qPCR; In vivo phenotyping
About Target Gene
Target gene : Zfp703
About TF
TF name : Hoxa3
About Regulatory State
Regulatory State : Active
Upstream Pathway Annotation of TF
GeneName Pathway Name Source Gene Number
Hoxa3 Activation of anterior HOX genes in hindbrain development during early embryogenesis reactome 120
Enhancer Associated Network
Overlapping Enhancers (mm9) 2 found
Enhancer ID Position Tissue Cell Disease
E_02033 chr8:28094779-28095609 pharyngeal arch fibroblast NA
E_02034 chr8:28094779-28095609 pharyngeal arch fibroblast NA
Expression of Target Genes for the Enhancer