Enhancer Detail

Comprehensive information about experimentally validated enhancers

About Enhancer
Enhancer ID: E_02006
Species: Mus musculus
Position : chr2:74925621-74939634
Year: 2020
Title: Chromatin topology and the timing of enhancer function at the HoxD locus.
Genome Build: mm10
Enhancer Type: Enhancer
Condition: Normal
PMID:  33229569
Tissue: forelimb bud
Tissue Ontology ID: UBERON:0005417
Cell Source: E9.5/E12.5 mouse forelimb buds
Cell Type: forelimb-bud mesenchymal cells
Experiment Type: Chromatin interaction assay; Functional perturbation assay; Gene expression assay
High Throughput Method: 4C-seq; RNA-seq
Low Throughput Method: CRISPR/Cas9 deletion and inversion; qRT-PCR; whole-mount in situ hybridization
About Target Gene
Target gene : Hoxd9
About TF
TF name : NA
About Regulatory State
Regulatory State : Active
Upstream Pathway Annotation of TF
GeneName Pathway Name Source Gene Number
Enhancer Associated Network
Overlapping Enhancers (mm10)
No overlapping enhancers found in mm10 at this locus.
Expression of Target Genes for the Enhancer