About Enhancer
| Enhancer ID: | E_01_0848 |
| Species: | human |
| Position : | chr22:23784215-23786215   |
| Biosample name: | |
| Experiment class : | High+Lowthroughput |
| Enhancer type: | Enhancer |
| Disease: | Liver cancer |
| Pubmed ID: | 33239431 |
| Enhancer experiment: | ShRNA infection, transient transfection, RNA extraction and reverse transcription polymerase chain reaction, chromatin immunoprecipitation assay (chip) and re chromatin, chip sequencing, chip sequencing, Western blot analysis, immunoprecipitation, faire qPCR |
| Enhancer experiment description: | SMARCB1, known initially as a bona fide tumor suppressor gene, was investigated in liver cancer. |
About Target gene
| Target gene : | SMARCB1 |
| Strong evidence: | qRT-PCR,qPCR,ChIP,3C |
| Less strong evidence: | RNA-Seq |
| Target gene experiment description: | SMARCB1, known initially as a bona fide tumor suppressor gene, was investigated in liver cancer. |
About TF
| TF name : | -- |
| TF experiment: | shRNA ????????RNA ?????????????????????? ?ChIP? ??????ChIP???ChIP????????????????FAIRE qPCR |
| TF experiment description: | SMARCB1, known initially as a bona fide tumor suppressor gene, was investigated in liver cancer. |
About Function
| Enhancer function : | SMARCB1, known initially as a bona fide tumor suppressor gene, was investigated in liver cancer. |
| Enhancer function experiment: | Immunohistochemical staining |
| Enhancer function experiment description: |
SMARCB1, known initially as a bona fide tumor suppressor gene, was investigated in liver cancer. |
About SNP
| SNP ID: | -- |
Upstream Pathway Annotation of TF
| GeneName | Pathway Name | Source | Gene Number |
|---|
Enhancer associated network
The number on yellow line represents the distance between enhancer and
target gene