About Enhancer
| Enhancer ID: | E_01_0756 |
| Species: | human |
| Position : | chr16:67559500-67561500   |
| Biosample name: | |
| Experiment class : | High+Lowthroughput |
| Enhancer type: | Enhancer |
| Disease: | Acute myeloid leukemia |
| Pubmed ID: | 30127433 |
| Enhancer experiment: | RT-PCR,ChIP-PCR,RNA-seq,FACS analysis,GRO-seq,ATAC-seq,ChIP-seq |
| Enhancer experiment description: | Go to: Introduction Cohesin is a multiprotein complex that cooperates with the sequence-specific DNA binding protein CTCF in forming key features of 3D genome organization such as topologically associated domains (TADs), contact domains and chromatin loops. |
About Target gene
| Target gene : | -- |
| Strong evidence: | qRT-PCR,qPCR,ChIP,3C |
| Less strong evidence: | RNA-Seq |
| Target gene experiment description: | Go to: Introduction Cohesin is a multiprotein complex that cooperates with the sequence-specific DNA binding protein CTCF in forming key features of 3D genome organization such as topologically associated domains (TADs), contact domains and chromatin loops. |
About TF
| TF name : | CTCF(MRD21) |
| TF experiment: | RT-PCR,ChIP-PCR,RNA-seq,FACS analysis,GRO-seq,ATAC-seq,ChIP-seq |
| TF experiment description: | Go to: Introduction Cohesin is a multiprotein complex that cooperates with the sequence-specific DNA binding protein CTCF in forming key features of 3D genome organization such as topologically associated domains (TADs), contact domains and chromatin loops. |
About Function
| Enhancer function : | Go to: Introduction Cohesin is a multiprotein complex that cooperates with the sequence-specific DNA binding protein CTCF in forming key features of 3D genome organization such as topologically associated domains (TADs), contact domains and chromatin loops. |
| Enhancer function experiment: | Immunohistochemical staining |
| Enhancer function experiment description: |
Go to: Introduction Cohesin is a multiprotein complex that cooperates with the sequence-specific DNA binding protein CTCF in forming key features of 3D genome organization such as topologically associated domains (TADs), contact domains and chromatin loops. |
About SNP
| SNP ID: | -- |
Upstream Pathway Annotation of TF
| GeneName | Pathway Name | Source | Gene Number |
|---|---|---|---|
| CTCF | Activation of anterior HOX genes in hindbrain development during early embryogenesis | reactome | 120 |
| CTCF | TGF_beta_Receptor | netpath | 220 |
Enhancer associated network
The number on yellow line represents the distance between enhancer and
target gene