About Enhancer

Enhancer ID: E_01_0641
Species: human
Position : chr4:108044928-108046928
Biosample name:
Experiment class : High+Lowthroughput
Enhancer type: Enhancer
Disease: Hepatocellular carcinoma
Pubmed ID:  30411085
Enhancer experiment: ChIP-seq,IHC staining,western blot,colony formation assay, and invasion assay,Luc assay,cloning of gene promoter regions,site-directed mutagenesis,transient transfections
Enhancer experiment description: LEF1 plays a pivotal role in HCC progression through transcriptional regulation of Oct4 and EMT regulators. LEF1 plays a pivotal role in HCC progression through transcriptional regulation of Oct4 and EMT regulators.

About Target gene

Target gene : --
Strong evidence: qRT-PCR,qPCR,ChIP,3C
Less strong evidence: RNA-Seq
Target gene experiment description: LEF1 plays a pivotal role in HCC progression through transcriptional regulation of Oct4 and EMT regulators. LEF1 plays a pivotal role in HCC progression through transcriptional regulation of Oct4 and EMT regulators.

About TF

TF name : LEF1(LEF-1,TCF10,TCF1ALPHA,TCF7L3)
TF experiment: ChIP-seq,IHC staining,western blot,colony formation assay, and invasion assay,Luc assay,cloning of gene promoter regions,site-directed mutagenesis,transient transfections
TF experiment description: LEF1 plays a pivotal role in HCC progression through transcriptional regulation of Oct4 and EMT regulators. LEF1 plays a pivotal role in HCC progression through transcriptional regulation of Oct4 and EMT regulators.

About Function

Enhancer function : LEF1 plays a pivotal role in HCC progression through transcriptional regulation of Oct4 and EMT regulators. LEF1 plays a pivotal role in HCC progression through transcriptional regulation of Oct4 and EMT regulators.
Enhancer function experiment: Immunohistochemical staining
Enhancer function
experiment description:		 LEF1 plays a pivotal role in HCC progression through transcriptional regulation of Oct4 and EMT regulators. LEF1 plays a pivotal role in HCC progression through transcriptional regulation of Oct4 and EMT regulators.

About SNP

SNP ID: --

Upstream Pathway Annotation of TF

GeneName Pathway Name Source Gene Number
LEF1 Alzheimer disease-presenilin pathway panther 98
LEF1 Binding of TCF/LEF:CTNNB1 to target gene promoters reactome 7
LEF1 C-MYB transcription factor network pid 87
LEF1 Ca2+ pathway reactome 62
LEF1 Cadherin signaling pathway panther 147
LEF1 Canonical Wnt signaling pathway ( C. elegans endoderm induction Wnt signaling pathway Diagram ) inoh 56
LEF1 Canonical Wnt signaling pathway ( Canonical Wnt signaling pathway Diagram ) inoh 56
LEF1 Canonical Wnt signaling pathway ( Drosophila Wingless/Wnt signaling pathway Diagram ) inoh 56
LEF1 Canonical Wnt signaling pathway ( Mammalian Wnt signaling pathway Diagram ) inoh 56
LEF1 Canonical Wnt signaling pathway ( Xenopus axis formation Wnt signaling pathway Diagram ) inoh 56
LEF1 Deactivation of the beta-catenin transactivating complex reactome 42
LEF1 Formation of the beta-catenin:TCF transactivating complex reactome 88
LEF1 Integrin-linked kinase signaling pid 46
LEF1 Mammalian Wnt signaling pathway ( Mammalian Wnt signaling pathway Diagram ) inoh 49
LEF1 Notch netpath 76
LEF1 Regulation of nuclear beta catenin signaling and target gene transcription pid 80
LEF1 Repression of WNT target genes reactome 14
LEF1 Signaling with Wnt (Canonical) ( C. elegans endoderm induction Wnt signaling pathway Diagram ) inoh 47
LEF1 Signaling with Wnt (Canonical) ( Canonical Wnt signaling pathway Diagram ) inoh 47
LEF1 Signaling with Wnt (Canonical) ( Drosophila Wingless/Wnt signaling pathway Diagram ) inoh 47
LEF1 Signaling with Wnt (Canonical) ( Mammalian Wnt signaling pathway Diagram ) inoh 47
LEF1 Signaling with Wnt (Canonical) ( Xenopus axis formation Wnt signaling pathway Diagram ) inoh 47
LEF1 Signaling with Wnt (Mammal) ( Mammalian Wnt signaling pathway Diagram ) inoh 47
LEF1 Signaling with Wnt (Xenopus) ( Xenopus axis formation Wnt signaling pathway Diagram ) inoh 19
LEF1 Signaling without Wnt (Canonical) ( C. elegans endoderm induction Wnt signaling pathway Diagram ) inoh 8
LEF1 Signaling without Wnt (Canonical) ( Canonical Wnt signaling pathway Diagram ) inoh 8
LEF1 Signaling without Wnt (Canonical) ( Drosophila Wingless/Wnt signaling pathway Diagram ) inoh 8
LEF1 Signaling without Wnt (Canonical) ( Mammalian Wnt signaling pathway Diagram ) inoh 8
LEF1 Signaling without Wnt (Canonical) ( Xenopus axis formation Wnt signaling pathway Diagram ) inoh 8
LEF1 Signaling without Wnt (Mammal) ( Mammalian Wnt signaling pathway Diagram ) inoh 8
LEF1 TGF_beta_Receptor netpath 220
LEF1 Wnt netpath 118
LEF1 Wnt signaling pathway panther 250
LEF1 Wnt signaling pathway kegg 135
LEF1 Adherens junction kegg 70
LEF1 Melanogenesis kegg 100
LEF1 Pathways in cancer kegg 321
LEF1 Colorectal cancer kegg 63
LEF1 Endometrial cancer kegg 52
LEF1 Prostate cancer kegg 85
LEF1 Acute myeloid leukemia kegg 53
LEF1 Arrhythmogenic right ventricular cardiomyopathy (ARVC) kegg 71
LEF1 Hs_Wnt_Signaling_Pathway_Netpath_WP363_78571 wikipathways 28
LEF1 Hs_Endoderm_Differentiation_WP2853_88152 wikipathways 62
LEF1 Hs_Mesodermal_Commitment_Pathway_WP2857_87780 wikipathways 47

Enhancer associated network

The number on yellow line represents the distance between enhancer and target gene

Expression of target genes for the enhancer

Enhancer associated SNPs