About Enhancer
| Enhancer ID: | E_01_0239 |
| Species: | human |
| Position : | chr1:170660059-170662059   |
| Biosample name: | |
| Experiment class : | High+Lowthroughput |
| Enhancer type: | Enhancer |
| Disease: | Malignancy |
| Pubmed ID: | 31588023 |
| Enhancer experiment: | Flow cytometry, PCR, immunofluorescence staining |
| Enhancer experiment description: | Motifs for the SE-associated TFs PRRX1, NFIC, and NFIX were enriched in both H3K27M sub_x0002_groups over normal pons (Figure 2D) |
About Target gene
| Target gene : | PRRX1 |
| Strong evidence: | qRT-PCR,qPCR,ChIP,3C |
| Less strong evidence: | RNA-Seq |
| Target gene experiment description: | Motifs for the SE-associated TFs PRRX1, NFIC, and NFIX were enriched in both H3K27M sub_x0002_groups over normal pons (Figure 2D) |
About TF
| TF name : | -- |
| TF experiment: | Flow cytometry,PCR,?????? |
| TF experiment description: | Motifs for the SE-associated TFs PRRX1, NFIC, and NFIX were enriched in both H3K27M sub_x0002_groups over normal pons (Figure 2D) |
About Function
| Enhancer function : | Motifs for the SE-associated TFs PRRX1, NFIC, and NFIX were enriched in both H3K27M sub_x0002_groups over normal pons (Figure 2D) |
| Enhancer function experiment: | Immunohistochemical staining |
| Enhancer function experiment description: |
Motifs for the SE-associated TFs PRRX1, NFIC, and NFIX were enriched in both H3K27M sub_x0002_groups over normal pons (Figure 2D) |
About SNP
| SNP ID: | -- |
Upstream Pathway Annotation of TF
| GeneName | Pathway Name | Source | Gene Number |
|---|
Enhancer associated network
The number on yellow line represents the distance between enhancer and
target gene