Enhancer Detail

Comprehensive information about experimentally validated enhancers

About Enhancer
Enhancer ID: E_01961
Species: Homo sapiens
Position : chr5:149631000-149636000
Year: 2022
Title: TCOF1 upregulation in triple-negative breast cancer promotes stemness and tumour growth and correlates with poor prognosis.
Genome Build: hg19
Enhancer Type: Enhancer
Condition: Disease
Disease Name: breast carcinoma
PMID:  34718356
MONDO: MONDO:0004989
Tissue: breast
Tissue Ontology ID: UBERON:0000310
Cell Source: Human breast cancer cell
Cell Type: malignant cell
Cell Ontology ID: CL:0001064
Experiment Type: Enhancer activity assay, TF binding assay, Functional perturbation assay
High Throughput Method: ChIP-seq; RNA-seq; DNase-seq
Low Throughput Method: Luciferase Reporter Assay; ChIP-RT-qPCR; CRISPR knockout; RT-RT-qPCR; Western blot
About Target Gene
Target gene : TCOF1
About TF
TF name : FOSL1
About Regulatory State
Regulatory State : Active
Upstream Pathway Annotation of TF
GeneName Pathway Name Source Gene Number
FOSL1 AP-1 transcription factor network pid 71
FOSL1 Calcineurin-regulated NFAT-dependent transcription in lymphocytes pid 50
FOSL1 Calcium signaling in the CD4+ TCR pathway pid 29
FOSL1 Downstream signaling in naïve CD8+ T cells pid 69
FOSL1 Gene expression of IL2 by AP-1 ( CD4 T cell receptor signaling (JNK cascade) ) inoh 5
FOSL1 Gene expression of IL2 by AP-1 ( CD4 T cell receptor signaling ) inoh 5
FOSL1 JNK cascade ( CD4 T cell receptor signaling (JNK cascade) ) inoh 12
FOSL1 JNK cascade ( CD4 T cell receptor signaling ) inoh 10
FOSL1 TGF-beta signaling pathway panther 88
FOSL1 Validated targets of C-MYC transcriptional activation pid 80
FOSL1 Validated transcriptional targets of AP1 family members Fra1 and Fra2 pid 37
FOSL1 Wnt signaling pathway kegg 135
Enhancer Associated Network
Overlapping Enhancers (hg19) 3 found
Enhancer ID Position Tissue Cell Disease
E_01962 chr5:149631000-149636000 breast malignant cell breast carcinoma
E_01963 chr5:149631000-149636000 breast malignant cell breast carcinoma
E_01964 chr5:149631000-149636000 breast malignant cell breast carcinoma
Expression of Target Genes for the Enhancer