Enhancer Detail

Comprehensive information about experimentally validated enhancers

About Enhancer
Enhancer ID: E_01874
Species: Homo sapiens
Position : chr8:119677099-119681977
Year: 2014
Title: Human colorectal cancer-specific CCAT1-L lncRNA regulates long-range chromatin interactions at the MYC locus.
Genome Build: hg19
Enhancer Type: Super-enhancer
Condition: Disease
Disease Name: colorectal cancer
PMID:  24662484
MONDO: MONDO:0005575
Tissue: colon
Tissue Ontology ID: UBERON:0001155
Cell Source: HT-29
CVCL ID: CVCL_0320
Cell Type: malignant cell
Cell Ontology ID: CL:0001064
Experiment Type: TF-binding/chromatin assay; Chromatin interaction assay; Disease-associated enhancer analysis
High Throughput Method: ChIP-seq
Low Throughput Method: ChIP-qPCR/ChIP; 3C; RT-qPCR/qPCR
About Target Gene
Target gene : MYC
About TF
TF name : TCF4
About Regulatory State
Regulatory State : Active
Upstream Pathway Annotation of TF
GeneName Pathway Name Source Gene Number
TCF4 AndrogenReceptor netpath 167
TCF4 CDO in myogenesis reactome 29
TCF4 Coregulation of Androgen receptor activity pid 61
TCF4 Formation of the beta-catenin:TCF transactivating complex reactome 88
TCF4 ID netpath 38
TCF4 Regulation of nuclear beta catenin signaling and target gene transcription pid 80
TCF4 TGF_beta_Receptor netpath 220
TCF4 Wnt netpath 118
TCF4 Hs_Corticotropin-releasing_hormone_signaling_pathway_WP2355_90017 wikipathways 41
Enhancer Associated Network
Overlapping Enhancers (hg19) 3 found
Enhancer ID Position Tissue Cell Disease
E_01872 chr8:119677099-119681977 colon malignant cell colorectal cancer
E_01873 chr8:119677099-119681977 colon malignant cell colorectal cancer
E_01875 chr8:119677099-119681977 colon malignant cell colorectal cancer
Expression of Target Genes for the Enhancer