Enhancer Detail

Comprehensive information about experimentally validated enhancers

About Enhancer
Enhancer ID: E_01094
Species: Homo sapiens
Position : chr17:38081807-38083807
Year: 2020
Title: CRISPRi-mediated functional analysis of lung disease-associated loci at non-coding regions.
Genome Build: hg19
Enhancer Type: Enhancer
Condition: Disease
Disease Name: asthma
PMID:  32500120
MONDO: MONDO:0004979
Tissue: lung
Tissue Ontology ID: UBERON:0002048
Cell Source: A-549
CVCL ID: CVCL_0023
Cell Type: epithelial cell of lung
Cell Ontology ID: CL:0000082
Experiment Type: Enhancer activity assay; Functional perturbation assay; Gene expression assay; Endogenous enhancer perturbation; Chromatin interaction assay; Chromatin-state profiling; Disease-variant functional analysis
High Throughput Method: Hi-C; ChIP-seq; eQTL analysis; GWAS
Low Throughput Method: CRISPRi; RT-qPCR; ChIP
About Target Gene
Target gene : GSDMB
About TF
TF name : NA
About Regulatory State
Regulatory State : Active
Upstream Pathway Annotation of TF
GeneName Pathway Name Source Gene Number
Enhancer Associated Network
Overlapping Enhancers (hg19) 3 found
Enhancer ID Position Tissue Cell Disease
E_00638 chr17:38082607-38083007 blood CD4-positive alpha-beta memory T cell asthma
E_04756 chr17:38082607-38083007 blood CD4-positive alpha-beta T cell asthma
E_04775 chr17:38082607-38083007 blood T cell asthma
Expression of Target Genes for the Enhancer