Enhancer Detail

Comprehensive information about experimentally validated enhancers

About Enhancer
Enhancer ID: E_00468
Species: Homo sapiens
Position : chr1:156093103-156094494
Year: 2021
Title: Genetic Variation in Enhancers Modifies Cardiomyopathy Gene Expression and Progression.
Genome Build: hg19
Enhancer Type: Enhancer
Condition: Disease
Disease Name: cardiomyopathy
PMID:  33478249
MONDO: MONDO:0004994
Tissue: left cardiac ventricle
Tissue Ontology ID: UBERON:0002084
Cell Source: human iPSC-derived cardiomyocytes
Cell Type: ventricular cardiomyocyte
Cell Ontology ID: CL:0000746
Experiment Type: Enhancer activity assay
High Throughput Method: Promoter Capture Hi-C; H3K27ac ChIP-seq; ATAC-seq; H3K4me3 ChIP-seq; CTCF ChIP-seq; cardiac TF ChIP-seq; gnomAD variant filtering; GTEx eQTL analysis
Low Throughput Method: Luciferase reporter assay in human iPSC-derived cardiomyocytes
About Target Gene
Target gene : LMNA
About TF
TF name : NA
About Regulatory State
Regulatory State : Active
Upstream Pathway Annotation of TF
GeneName Pathway Name Source Gene Number
Enhancer Associated Network
Overlapping Enhancers (hg19) 3 found
Enhancer ID Position Tissue Cell Disease
E_00467 chr1:156092084-156093294 left cardiac ventricle ventricular cardiomyocyte cardiomyopathy
E_00610 chr1:156093103-156094494 heart left ventricle cardiac muscle cell NA
E_00611 chr1:156093103-156094494 heart left ventricle cardiac muscle cell NA
Expression of Target Genes for the Enhancer