Enhancer Detail

Comprehensive information about experimentally validated enhancers

About Enhancer
Enhancer ID: E_00451
Species: Homo sapiens
Position : chr6:151953109-151955347
Year: 2016
Title: Noncoding somatic and inherited single-nucleotide variants converge to promote ESR1 expression in breast cancer.
Genome Build: hg19
Enhancer Type: Enhancer
Condition: Disease
Disease Name: breast carcinoma
PMID:  27571262
MONDO: MONDO:0004989
Tissue: pleural effusion
Tissue Ontology ID: UBERON:0000175
Cell Source: T-47D
CVCL ID: CVCL_0553
Cell Type: malignant cell
Cell Ontology ID: CL:0001064
Experiment Type: Functional perturbation assay; Enhancer activity assay
High Throughput Method: DNase-seq; H3K27ac ChIP-seq
Low Throughput Method: CRISPR-Cas9 enhancer deletion; RT-qPCR
About Target Gene
Target gene : ESR1
About TF
TF name : NA
About Regulatory State
Regulatory State : Active
Upstream Pathway Annotation of TF
GeneName Pathway Name Source Gene Number
Enhancer Associated Network
Overlapping Enhancers (hg19) 3 found
Enhancer ID Position Tissue Cell Disease
E_04484 chr6:151917241-152028736 breast malignant cell Breast Cancer
E_00046 chr6:151953109-151955347 Mammary gland / breast breast carcinoma epithelial cell Breast cancer
E_00699 chr6:151953109-151955347 breast malignant cell breast carcinoma
Expression of Target Genes for the Enhancer