Enhancer Detail

Comprehensive information about experimentally validated enhancers

About Enhancer
Enhancer ID: E_00375
Species: Homo sapiens
Position : chr8:128821500-128822500
Year: 2018
Title: Promoter of lncRNA Gene PVT1 Is a Tumor-Suppressor DNA Boundary Element.
Genome Build: hg19
Enhancer Type: Enhancer
Condition: Disease
Disease Name: breast carcinoma
PMID:  29731168
MONDO: MONDO:0004989
Tissue: breast
Tissue Ontology ID: UBERON:0000310
Cell Source: MDA-MB-231
CVCL ID: CVCL_0062
Cell Type: breast carcinoma epithelial cell
Experiment Type: Enhancer activity; enhancer-promoter competition; endogenous perturbation
High Throughput Method: ATAC-seq; H3K27ac ChIP-seq/HiChIP; RNA-seq
Low Throughput Method: Luciferase reporter assay; CRISPRi; PVT1 promoter genome editing; RT-qPCR; Western blot
About Target Gene
Target gene : MYC
About TF
TF name : NA
About Regulatory State
Regulatory State : Active
Upstream Pathway Annotation of TF
GeneName Pathway Name Source Gene Number
Enhancer Associated Network
Overlapping Enhancers (hg19) 3 found
Enhancer ID Position Tissue Cell Disease
E_02292 chr8:128750000-129000000 breast malignant cell prostate cancer
E_00459 chr8:128821500-128822500 breast malignant cell breast carcinoma
E_00063 chr8:128821774-128822358 breast malignant cell breast cancer
Expression of Target Genes for the Enhancer