About Enhancer
| Enhancer ID: | E_00039 |
| Species: | Homo sapiens |
| Position : | chr7:117075400-117076000   |
| Year: | 2020 |
| Title: | Looping of upstream cis-regulatory elements is required for CFTR expression in human airway epithelial cells. |
| Genome Build: | hg19 |
| Enhancer Type: | Enhancer |
| Condition: | Normal |
| PMID: | 32095812 |
| Tissue: | pleural effusion |
| Tissue Ontology ID: | UBERON:0000175 |
| Cell Source: | Calu-3 |
| CVCL ID: | CVCL_0609 |
| Cell Type: | epithelial cell |
| Cell Ontology ID: | CL:0000066 |
| Experiment Type: | Enhancer activity assay; TF binding assay; Functional perturbation assay; Chromatin interaction assay; Endogenous enhancer perturbation; Disease-variant functional analysis |
| High Throughput Method: | ChIP-seq; H3K27ac ChIP-seq; 4C-seq |
| Low Throughput Method: | CRISPR/Cas9 deletion; Luciferase reporter assay; RT-qPCR; ChIP-qPCR; CRISPR-Cas9 endogenous deletion/editing |
About Target Gene
| Target gene : | CFTR |
About TF
| TF name : | NFE2L2 |
About Regulatory State
| Regulatory State : | Active |
Upstream Pathway Annotation of TF
| GeneName | Pathway Name | Source | Gene Number |
|---|---|---|---|
| NFE2L2 | Protein processing in endoplasmic reticulum | kegg | 166 |
| NFE2L2 | Hs_Photodynamic_therapy-induced_unfolded_protein_response_WP3613_89330 | wikipathways | 6 |
| NFE2L2 | Hs_Transcriptional_activation_by_NRF2_WP3_79527 | wikipathways | 6 |
Enhancer Associated Network
Overlapping Enhancers (hg19)
9 found
| Enhancer ID | Position | Tissue | Cell | Disease |
|---|---|---|---|---|
| E_04477 | chr7:117074000-117077000 | nasal cavity epithelium | nasal epithelial cell | NA |
| E_00034 | chr7:117075400-117076000 | bronchus | bronchial epithelial cell | NA |
| E_00035 | chr7:117075400-117076000 | pleural effusion | epithelial cell | NA |
| E_00036 | chr7:117075400-117076000 | bronchus | bronchial epithelial cell | NA |
| E_00037 | chr7:117075400-117076000 | pleural effusion | epithelial cell | NA |
| E_00038 | chr7:117075400-117076000 | bronchus | bronchial epithelial cell | NA |
| E_03835 | chr7:117075400-117076000 | bronchus | bronchial epithelial cell | NA |
| E_03882 | chr7:117075514-117075933 | NA | NA | NA |
| E_03883 | chr7:117075514-117075933 | NA | NA | NA |
Expression of Target Genes for the Enhancer