About Enhancer
| Enhancer ID: | E_00011 |
| Species: | Homo sapiens |
| Position : | chr7:128573081-128573816   |
| Year: | 2023 |
| Title: | An autoimmune pleiotropic SNP modulates IRF5 alternative promoter usage through ZBTB3-mediated chromatin looping. |
| Genome Build: | hg19 |
| Enhancer Type: | Enhancer |
| Condition: | Disease |
| Disease Name: | autoimmune disease |
| PMID: | 36869052 |
| MONDO: | MONDO:0007179 |
| Tissue: | blood |
| Tissue Ontology ID: | UBERON:0000178 |
| Cell Source: | Primary CD14+ monocytes |
| Cell Type: | CD14-positive monocyte |
| Cell Ontology ID: | CL:0001054 |
| Experiment Type: | Enhancer activity assay, TF binding assay, Chromatin interaction assay, Functional perturbation assay; Disease-variant functional analysis |
| High Throughput Method: | RNA-seq, ChIP-seq, ATAC-seq, 3C-seq |
| Low Throughput Method: | Luciferase Reporter Assay, CRISPR Knockout, CRISPRi, CRISPRa, ChIP-RT-qPCR, 3C assay, 4C assay, EMSA, RT-RT-qPCR, Western blot |
About Target Gene
| Target gene : | IRF5 |
About TF
| TF name : | ZBTB3 |
About Regulatory State
| Regulatory State : | Active |
Upstream Pathway Annotation of TF
| GeneName | Pathway Name | Source | Gene Number |
|---|
Enhancer Associated Network
Overlapping Enhancers (hg19)
6 found
| Enhancer ID | Position | Tissue | Cell | Disease |
|---|---|---|---|---|
| E_00026 | chr7:128573036-128573717 | prostate gland | malignant cell | autoimmune disease |
| E_00012 | chr7:128573081-128574098 | blood | CD14-positive monocyte | autoimmune disease |
| E_00013 | chr7:128573081-128574098 | blood | CD14-positive monocyte / macrophage | autoimmune disease |
| E_00023 | chr7:128573081-128573816 | blood | monocyte | autoimmune disease |
| E_00024 | chr7:128573081-128574098 | blood | monocyte | autoimmune disease |
| E_00027 | chr7:128573081-128574098 | blood | CD14-positive monocyte / macrophage | autoimmune disease |
Expression of Target Genes for the Enhancer