SEdb 3.0
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Super-enhancer overview

SE ID: SE_04_000200904
Species: Human
Data source: NGDC GSA
Biosample type: Cell line
Tissue type: Blood
Biosample name: cold shocked K562
Genomic region: chr16:11223815-11257323
Size: 33508
Super-enhancer rank 904
Number of SE elements: 5
ChIP density(Case|Control): 41995.5764|5773.4284
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SOCS1 ;
ROSE Overlap SOCS1 ;
ROSE Proximal PRM2 ; TNP2 ; PRM1 ; PRM3 ; MIR548H2 ;
ROSE Closest SOCS1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA PRM2 ; PRM3 ; PRM1 ; TNP2 ; MIR548H2 ; SOCS1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_04_000200904 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers