SEdb 3.0
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Super-enhancer overview

SE ID: SE_04_000200902
Species: Human
Data source: NGDC GSA
Biosample type: Cell line
Tissue type: Blood
Biosample name: cold shocked K562
Genomic region: chr1:44029252-44049866
Size: 20614
Super-enhancer rank 902
Number of SE elements: 2
ChIP density(Case|Control): 40108.6598|3795.0374
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SLC6A9 ;
ROSE Overlap SLC6A9 ;
ROSE Proximal B4GALT2 ; SLC6A9 ; CCDC24 ;
ROSE Closest SLC6A9 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA B4GALT2 ; DPH2 ; SLC6A9 ; KLF17 ; CCDC24 ; ATP6V0B ; IPO13 ;

Network diagram of super-enhancer and associated genes

Expression of SE_04_000200902 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers