SEdb 3.0
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Super-enhancer overview

SE ID: SE_04_000200868
Species: Human
Data source: NGDC GSA
Biosample type: Cell line
Tissue type: Blood
Biosample name: cold shocked K562
Genomic region: chr1:154154261-154188394
Size: 34133
Super-enhancer rank 868
Number of SE elements: 5
ChIP density(Case|Control): 42656.0101|5471.5199
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TPM3 ;
ROSE Overlap TPM3 ; NUP210L ;
ROSE Proximal UBAP2L ; MIR5698 ; TPM3 ; NUP210L ; C1orf43 ; C1orf189 ; MIR190B ;
ROSE Closest TPM3 ;
Lasso TPM3 ; NUP210L ; UBAP2L ; HAX1 ; C1orf43 ; C1orf189 ;
PreSTIGE ;
ABC TPM3 ;
BETA C1orf43 ; C1orf189 ; MIR5698 ; TPM3 ; UBAP2L ; NUP210L ; MIR190B ;

Network diagram of super-enhancer and associated genes

Expression of SE_04_000200868 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers