SEdb 3.0
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Super-enhancer overview

SE ID: SE_04_000200837
Species: Human
Data source: NGDC GSA
Biosample type: Cell line
Tissue type: Blood
Biosample name: cold shocked K562
Genomic region: chr17:7232231-7243957
Size: 11726
Super-enhancer rank 837
Number of SE elements: 1
ChIP density(Case|Control): 39160.1496|1361.3886
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PHF23 ;
ROSE Overlap GABARAP ; PHF23 ; CTDNEP1 ; DVL2 ;
ROSE Proximal CLDN7 ; DLG4 ; MIR324 ; ACADVL ; SLC2A4 ; ELP5 ;
ROSE Closest PHF23 ;
Lasso ;
PreSTIGE ;
ABC NEURL4 ; ACAP1 ;
BETA PHF23 ; ELP5 ; DVL2 ; SLC2A4 ; ACADVL ; DLG4 ; EIF5A ; CTDNEP1 ; GPS2 ; NEURL4 ; CLDN7 ; ASGR1 ; ACAP1 ; YBX2 ; MIR324 ; GABARAP ;

Network diagram of super-enhancer and associated genes

Expression of SE_04_000200837 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers