SEdb 3.0
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Super-enhancer overview

SE ID: SE_04_000200745
Species: Human
Data source: NGDC GSA
Biosample type: Cell line
Tissue type: Blood
Biosample name: cold shocked K562
Genomic region: chr6:43769494-43775454
Size: 5960
Super-enhancer rank 745
Number of SE elements: 1
ChIP density(Case|Control): 41625.832|1163.988
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: VEGFA ;
ROSE Overlap VEGFA ;
ROSE Proximal VEGFA ;
ROSE Closest VEGFA ;
Lasso ;
PreSTIGE ;
ABC ;
BETA VEGFA ; MRPS18A ;

Network diagram of super-enhancer and associated genes

Expression of SE_04_000200745 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers