SEdb 3.0
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Super-enhancer overview

SE ID: SE_04_000200728
Species: Human
Data source: NGDC GSA
Biosample type: Cell line
Tissue type: Blood
Biosample name: cold shocked K562
Genomic region: chr8:67054035-67068376
Size: 14341
Super-enhancer rank 728
Number of SE elements: 2
ChIP density(Case|Control): 43156.3713|2237.196
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: COPS5 ;
ROSE Overlap CSPP1 ; COPS5 ;
ROSE Proximal CSPP1 ; PPP1R42 ;
ROSE Closest COPS5 ;
Lasso CSPP1 ; COPS5 ; VCPIP1 ; PPP1R42 ; C8orf44 ;
PreSTIGE ;
ABC ;
BETA CSPP1 ; COPS5 ; TCF24 ; PPP1R42 ;

Network diagram of super-enhancer and associated genes

Expression of SE_04_000200728 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers