SEdb 3.0
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Super-enhancer overview

SE ID: SE_04_000200723
Species: Human
Data source: NGDC GSA
Biosample type: Cell line
Tissue type: Blood
Biosample name: cold shocked K562
Genomic region: chr9:129020722-129041761
Size: 21039
Super-enhancer rank 723
Number of SE elements: 3
ChIP density(Case|Control): 44901.4338|3915.3579
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SH3GLB2 ;
ROSE Overlap SH3GLB2 ; FAM73B ;
ROSE Proximal DOLPP1 ;
ROSE Closest SH3GLB2 ;
Lasso CRAT ; PPP2R4 ; SH3GLB2 ; FAM73B ; DOLPP1 ;
PreSTIGE ;
ABC ;
BETA PPP2R4 ; DOLPP1 ; FAM73B ; SH3GLB2 ; CRAT ; DOLK ; NUP188 ;

Network diagram of super-enhancer and associated genes

Expression of SE_04_000200723 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers